RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 OPN3Q9H1Y3 402 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-203ENST00000471658 H2AFY2Q9P0M6 372 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-203ENST00000471658 PHF3Q92576 2039 aaKnown RBP16.93■□□□□ 0.3
PSPC1-203ENST00000471658 AHCYL1O43865 530 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 XPNPEP2O43895 674 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 CRHP06850 196 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 CENPAP49450 140 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 RPS7P62081 194 aaKnown RBP16.93■□□□□ 0.3
PSPC1-203ENST00000471658 C9orf135Q5VTT2 229 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 MEPCEQ7L2J0 689 aaKnown RBP16.93■□□□□ 0.3
PSPC1-203ENST00000471658 ZBTB46Q86UZ6 589 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 LIX1LQ8IVB5 337 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 ZNF610Q8N9Z0 462 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 PROKR2Q8NFJ6 384 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 BPIFB6Q8NFQ5 453 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 OR2T4Q8NH00 348 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 ZFP3Q96NJ6 502 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 TEAD3Q99594 435 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 RHNO1Q9BSD3 238 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 RBM24Q9BX46 236 aaKnown RBP16.93■□□□□ 0.3
PSPC1-203ENST00000471658 LINC00470Q9BZP3 86 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 CRLF2Q9HC73 371 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 GPR35Q9HC97 309 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 PLSCR4Q9NRQ2 329 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 FKBP7Q9Y680 259 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 FREM1Q5H8C1 2179 aa16.93■□□□□ 0.3
PSPC1-203ENST00000471658 DHHO43323 396 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 KRT33AO76009 404 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 MPZL1O95297 269 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 SCG5P05408 212 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 CDAP32320 146 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 CDH11P55287 796 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 ROR2Q01974 943 aaKnown RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 FAPQ12884 760 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 LINC01590Q5TEZ4 76 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 MEDAGQ5VYS4 303 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 TMEM211Q6ICI0 200 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 ZNF511Q8NB15 262 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 RND1Q92730 232 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 KISS1RQ969F8 398 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 ZMYND19Q96E35 227 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 UPB1Q9UBR1 384 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 UGT2A1Q9Y4X1 527 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 TVP23AA6NH52 213 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 EIF4E1BA6NMX2 242 aaKnown RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 PRODHO43272 600 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 LRRTM2O43300 516 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 KHDRBS3O75525 346 aaKnown RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 APOL3O95236 402 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 CRABP1P29762 137 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 GSTT1P30711 240 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 ZNF133P52736 654 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-203ENST00000471658 ZNF786Q8N393 782 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 POMGNT2Q8NAT1 580 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 OR6K6Q8NGW6 343 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 Q96MT0 163 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 SFXN3Q9BWM7 321 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 PROCRQ9UNN8 238 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 LRCH1Q9Y2L9 728 aa16.92■□□□□ 0.3
PSPC1-203ENST00000471658 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 SEC14L2O76054 403 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 GLCEO94923 617 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 BMP5P22003 454 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 HTR1FP30939 366 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 ZNF91Q05481 1191 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 HSPB2Q16082 182 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 CEACAM16Q2WEN9 425 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 C10orf128Q5T292 105 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 FBXW9Q5XUX1 488 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 UGT2A3Q6UWM9 527 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.91■□□□□ 0.3
PSPC1-203ENST00000471658 GID4Q8IVV7 300 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 FNDC8Q8TC99 324 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 SMAP2Q8WU79 429 aaPredicted RBP16.91■□□□□ 0.3
PSPC1-203ENST00000471658 B3GAT2Q9NPZ5 323 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 RELNP78509 3460 aa16.91■□□□□ 0.3
PSPC1-203ENST00000471658 A0A1W2PPL8 197 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 ADORA2A-AS1P86434 159 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 TEKQ02763 1124 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 MEP1BQ16820 701 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 DNM1P34Q6PK57 102 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 SHFQ7M4L6 423 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 SGCDQ92629 289 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 RACGAP1Q9H0H5 632 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 SEC61A2Q9H9S3 476 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 MOKQ9UQ07 419 aa16.9■□□□□ 0.3
PSPC1-203ENST00000471658 INTS1Q8N201 2190 aaKnown RBP16.89■□□□□ 0.29
PSPC1-203ENST00000471658 SH3D21A4FU49 640 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 OR6C65A6NJZ3 312 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 SLC1A7O00341 560 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 FAM20BO75063 409 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 TFP02787 698 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 MRPL3P09001 348 aaKnown RBP16.89■□□□□ 0.29
PSPC1-203ENST00000471658 DBTP11182 482 aaKnown RBP16.89■□□□□ 0.29
PSPC1-203ENST00000471658 SLC35D3Q5M8T2 416 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 LUZP2Q86TE4 346 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 ATCAYQ86WG3 371 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 GGHQ92820 318 aa16.89■□□□□ 0.29
PSPC1-203ENST00000471658 RFKQ969G6 155 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms