RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CPEB2Q7Z5Q1 589 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ZNF546Q86UE3 836 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ZNF573Q86YE8 665 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 PRSS58Q8IYP2 241 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ADGRF3Q8IZF5 1079 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 BPIFB2Q8N4F0 458 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ZNF610Q8N9Z0 462 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 FAM156AQ8NDB6 213 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 HES7Q9BYE0 225 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 PPIL3Q9H2H8 161 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ZNF395Q9H8N7 513 aaPredicted RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 FIGNL2A6NMB9 653 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 GABRR3A8MPY1 467 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 TRIM77I1YAP6 450 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 HMGN2P05204 90 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 EIF4EP06730 217 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 HNF1AP20823 631 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ELK4P28324 431 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 SLC5A2P31639 672 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ARF5P84085 180 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 OR8B8Q15620 311 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 USF2Q15853 346 aaPredicted RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 GLYR1Q49A26 553 aaPredicted RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 AKIRIN2Q53H80 203 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 TANGO2Q6ICL3 276 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 TFAP2EQ6VUC0 442 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 TMEM229BQ8NBD8 167 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ZBTB34Q8NCN2 500 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 CNIH3Q8TBE1 160 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 CREB3L4Q8TEY5 395 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 CASTOR1Q8WTX7 329 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 APH1BQ8WW43 257 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 RAB3CQ96E17 227 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 SDSLQ96GA7 329 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ABHD6Q9BV23 337 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 GSX2Q9BZM3 304 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 ULBP2Q9BZM5 246 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 SMG9Q9H0W8 520 aaKnown RBP5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 NDRG3Q9UGV2 375 aa5.65□□□□□ -1.5
CCDC144A-212ENST00000470068 MYH6P13533 1939 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 SLC5A10A0PJK1 596 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 B4DEV8 164 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 ZNF587BE7ETH6 402 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 ST8SIA3O43173 380 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 CH25HO95992 272 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 MBPP02686 304 aaPredicted RBP5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 STAG3L2P0CL84 134 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 MGMTP16455 207 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 ENPP1P22413 925 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 AADACP22760 399 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 HTR2BP41595 481 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 DIO1P49895 249 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 BPIFB3P59826 476 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 ENDOGQ14249 297 aaKnown RBP5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 FZD2Q14332 565 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 OPCMLQ14982 345 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 C1orf53Q5VUE5 145 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 MFSD12Q6NUT3 480 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 ZNF585AQ6P3V2 769 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 FAHD1Q6P587 224 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 B3GNT8Q7Z7M8 397 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 OR9I1Q8NGQ6 314 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 SLCO4A1Q96BD0 722 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 TIMD4Q96H15 378 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 SLC25A44Q96H78 314 aaPredicted RBP5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 MRGPRX1Q96LB2 322 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 BARHL1Q9BZE3 327 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 FZD3Q9NPG1 666 aa5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 SIDT1Q9NXL6 827 aaKnown RBP5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 RPH3AQ9Y2J0 694 aaPredicted RBP5.65□□□□□ -1.51
CCDC144A-212ENST00000470068 A0A0B4J2A0 478 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 A0A1B0GTQ1 180 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 TMEM269A0A1B0GVZ9 245 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 RNASEK-C17orf49H0YIS7 233 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 ARPC3O15145 178 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 HRO43593 1189 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 PIP5K1CO60331 668 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 GDF9O60383 454 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 CSO75390 466 aaKnown RBP5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 ZNF728P0DKX0 622 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 CTHP32929 405 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 GPR4P46093 362 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 RPL27P61353 136 aaKnown RBP5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 MFAP5Q13361 173 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 C1orf61Q13536 156 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 COTL1Q14019 142 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 TBC1D28Q2M2D7 210 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 LGALSLQ3ZCW2 172 aaPredicted RBP5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 FAM74A3Q4VXF1 159 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 SFXN4Q6P4A7 337 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 NPSR1Q6W5P4 371 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 DPY19L4Q7Z388 723 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 SPICQ8N5J4 248 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 PARP16Q8N5Y8 322 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 PXT1Q8NFP0 134 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 OR13C8Q8NGS7 320 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 GPX8Q8TED1 209 aa5.64□□□□□ -1.51
CCDC144A-212ENST00000470068 PTX4Q96A99 478 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms