RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SMURF2Q9HAU4 748 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 CMTM6Q9NX76 183 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 REV1Q9UBZ9 1251 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 A4GNTQ9UNA3 340 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 HIF3AQ9Y2N7 669 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 MED31Q9Y3C7 131 aa14□□□□□ -0.17
COL9A3-208ENST00000469802 ELOVL7A1L3X0 281 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 MCIDASD6RGH6 385 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 PIP5K1CO60331 668 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 ACADSP16219 412 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 IL2RGP31785 369 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 LSP1P33241 339 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 THBS2P35442 1172 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 ALDH3B1P43353 468 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 CHN2P52757 468 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 SELENOWP63302 87 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 MYBPC1Q00872 1141 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 GUCY1A3Q02108 690 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 MAD2L1BPQ15013 274 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-208ENST00000469802 SLC36A2Q495M3 483 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 ELFN2Q5R3F8 820 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 FAM120AOSQ5T036 256 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 SLC16A14Q7RTX9 510 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 PHC2Q8IXK0 858 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 SYT14Q8NB59 555 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 HPS1Q92902 700 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 NABP1Q96AH0 204 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 RCN3Q96D15 328 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 C1orf159Q96HA4 380 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 CHODLQ9H9P2 273 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 MAN2C1Q9NTJ4 1040 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 ARMCX1Q9P291 453 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 STX18Q9P2W9 335 aaKnown RBP13.99□□□□□ -0.17
COL9A3-208ENST00000469802 UGT2A1Q9Y4X1 527 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 TANC2Q9HCD6 1990 aa13.99□□□□□ -0.17
COL9A3-208ENST00000469802 IGLV3-9A0A075B6K5 115 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 IGKV1D-43A0A0B4J1Z2 117 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 HTR3EA5X5Y0 456 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 PHF1O43189 567 aaPredicted RBP13.98□□□□□ -0.17
COL9A3-208ENST00000469802 MGRN1O60291 552 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 IGHMP01871 453 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 HPXP02790 462 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 FUT4P22083 530 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 ZNF84P51523 738 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 SEC24CP53992 1094 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 MRPS34P82930 218 aaKnown RBP13.98□□□□□ -0.17
COL9A3-208ENST00000469802 ST3GAL3Q11203 375 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 TRIP10Q15642 601 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 TMEM53Q6P2H8 277 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 ARPINQ7Z6K5 226 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 OFCC1Q8IZS5 231 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 POU5F2Q8N7G0 328 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 HDAC2Q92769 488 aaKnown RBP13.98□□□□□ -0.17
COL9A3-208ENST00000469802 TXNIPQ9H3M7 391 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 GMPR2Q9P2T1 348 aaKnown RBP13.98□□□□□ -0.17
COL9A3-208ENST00000469802 FZR1Q9UM11 496 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 AP3M1Q9Y2T2 418 aa13.98□□□□□ -0.17
COL9A3-208ENST00000469802 SLC22A23A1A5C7 686 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 LYNX1G3V0Z9 82 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 NCR1O76036 304 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 SLC2A10O95528 541 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 TGFAP01135 160 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 LYNX1P0DP58 116 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 CCL2P13500 99 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 ZNF250P15622 560 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 MRPS11P82912 194 aaKnown RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 FMODQ06828 376 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 FHL1Q13642 323 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 TAF11Q15544 211 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 RGS7BPQ6MZT1 257 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 C8orf82Q6P1X6 216 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 SLC15A3Q8IY34 581 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 LRRC75AQ8NAA5 344 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 RBM15BQ8NDT2 890 aaKnown RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 RP9Q8TA86 221 aaKnown RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 BPIFA2Q96DR5 249 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 SNX18Q96RF0 628 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 SIAEQ9HAT2 523 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 CDH20Q9HBT6 801 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 ZNF346Q9UL40 294 aaKnown RBP13.97□□□□□ -0.17
COL9A3-208ENST00000469802 SNX13Q9Y5W8 968 aa13.97□□□□□ -0.17
COL9A3-208ENST00000469802 FFAR1O14842 300 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 FAM157BP0CG42 384 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 NR2C1P13056 603 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 SRD5A1P18405 259 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 ACHEP22303 614 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 APEX1P27695 318 aaKnown RBP13.96□□□□□ -0.17
COL9A3-208ENST00000469802 CDH15P55291 814 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 ERVS71-1P61550 626 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 LAPTM4AQ15012 233 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 TBC1D28Q2M2D7 210 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 ALG10Q5BKT4 473 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 SLC25A47Q6Q0C1 308 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 VTCN1Q7Z7D3 282 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 LZICQ8WZA0 190 aa13.96□□□□□ -0.17
COL9A3-208ENST00000469802 ALG12Q9BV10 488 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms