RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 CWH43Q9H720 699 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 GPATCH2LQ9NWQ4 482 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 UXTQ9UBK9 157 aaPredicted RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 CD84Q9UIB8 345 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 LSM7Q9UK45 103 aaKnown RBP3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 WSB1Q9Y6I7 421 aa3.29□□□□□ -1.88
GAPVD1-211ENST00000467707 AKNAQ7Z591 1439 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 NSD2O96028 1365 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CEMIPQ8WUJ3 1361 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 NFASCO94856 1347 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 SIRPB1O00241 398 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 ZNF30P17039 623 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 AZU1P20160 251 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CNR1P21554 472 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 HOXA9P31269 272 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CXCL5P42830 114 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 RFX3P48380 749 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 C21orf59P57076 290 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CCNA1P78396 465 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 PAX5Q02548 391 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 TGM3Q08188 693 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 LYPD2Q6UXB3 125 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 LINC01551Q86U37 167 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 IQCKQ8N0W5 287 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 FAM81AQ8TBF8 368 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 DNAJC19Q96DA6 116 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 PKNOX2Q96KN3 472 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 SDHCQ99643 169 aaPredicted RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 HDHD3Q9BSH5 251 aaPredicted RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 PARP12Q9H0J9 701 aaKnown RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CDC42EP4Q9H3Q1 356 aaKnown RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 RPF2Q9H7B2 306 aaKnown RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 TMEM185BQ9H7F4 350 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 ZNF160Q9HCG1 818 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 FGF20Q9NP95 211 aaPredicted RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 SLCO1B3Q9NPD5 702 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 PITPNC1Q9UKF7 332 aa3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 PRG3Q9Y2Y8 225 aaPredicted RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
GAPVD1-211ENST00000467707 CNTNAP1P78357 1384 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 COL16A1Q07092 1604 aaPredicted RBP3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 MAPK8IP3Q9UPT6 1336 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ATRXP46100 2492 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 GLYATL1P3A0A0U1RQE8 302 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 CDH16O75309 829 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 H6PDO95479 791 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 RAB3DO95716 219 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 TSPAN13O95857 204 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 RETP07949 1114 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 AQP2P41181 271 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 SLC1A1P43005 524 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 SYKP43405 635 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 CRISP3P54108 245 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ACTA2P62736 377 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ACTG2P63267 376 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ACTC1P68032 377 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ACTA1P68133 377 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 IRX3P78415 501 aaPredicted RBP3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 REG3AQ06141 175 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 TWF1Q12792 350 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 CCNJQ5T5M9 372 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 BZW1Q7L1Q6 419 aaKnown RBP3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 STRADAQ7RTN6 431 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ASCL5Q7RTU5 278 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 SLC16A14Q7RTX9 510 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 HDDC2Q7Z4H3 204 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 SCD5Q86SK9 330 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 PCP2Q8IVA1 136 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 SLC34A3Q8N130 599 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 HSD17B11Q8NBQ5 300 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 OR10G4Q8NGN3 311 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 OR4S2Q8NH73 311 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 KIFAP3Q92845 792 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 LZTS2Q9BRK4 669 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 C20orf24Q9BUV8 137 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 OR51M1Q9H341 326 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 ZNF629Q9UEG4 869 aaPredicted RBP3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 RAB26Q9ULW5 256 aa3.27□□□□□ -1.89
GAPVD1-211ENST00000467707 NINLQ9Y2I6 1382 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 MAP3K15Q6ZN16 1313 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 CLPXO76031 633 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 OR2F2O95006 317 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 CLIC3O95833 236 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 IGLV2-23P01705 113 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 ANXA5P08758 320 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 HRH1P35367 487 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 CX3CR1P49238 355 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 CYB561P49447 251 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 UBE2AP49459 152 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 PRRX1P54821 245 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 SLC7A9P82251 487 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 TSPO2Q5TGU0 170 aa3.26□□□□□ -1.89
GAPVD1-211ENST00000467707 AGBL2Q5U5Z8 902 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms