RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 OR4L1Q8NH43 312 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 OR1F12Q8NHA8 337 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 RNF133Q8WVZ7 376 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 GTF3AQ92664 365 aaKnown RBP2.95□□□□□ -1.94
CCDC58-203ENST00000466854 SMARCD2Q92925 531 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 RNF145Q96MT1 663 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 SERPINB11Q96P15 392 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 AGAP4Q96P64 663 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 DEFB118Q96PH6 123 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 SLC38A2Q96QD8 506 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 PRRT1Q99946 306 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 RSG1Q9BU20 258 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 C6orf62Q9GZU0 229 aaPredicted RBP2.95□□□□□ -1.94
CCDC58-203ENST00000466854 CHRNA10Q9GZZ6 450 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 GANQ9H2C0 597 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 RPS10P5Q9NQ39 176 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 RHBDL2Q9NX52 303 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 MAT2BQ9NZL9 334 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 CLN8Q9UBY8 286 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 BCAP29Q9UHQ4 241 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 FBXL3Q9UKT7 428 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF490Q9ULM2 529 aaPredicted RBP2.95□□□□□ -1.94
CCDC58-203ENST00000466854 PAIP2BQ9ULR5 123 aaKnown RBP2.95□□□□□ -1.94
CCDC58-203ENST00000466854 MMACHCQ9Y4U1 282 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 SELENOKQ9Y6D0 94 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 PCNX3Q9H6A9 2034 aa2.95□□□□□ -1.94
CCDC58-203ENST00000466854 CACNA1GO43497 2377 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 TRBV5-5A0A0J9YX44 114 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SMCO3A2RU48 225 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 TMEM114B3SHH9 223 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 NPIPA3F8WFD2 350 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 M0R296 226 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CCSO14618 274 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ARPC1BO15143 372 aaKnown RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 STX7O15400 261 aaKnown RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 PRKAB2O43741 272 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SRPX2O60687 465 aaPredicted RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SH3BGRLO75368 114 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SC5DO75845 299 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 OR2J3O76001 311 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 LYPLA2O95372 231 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ETHE1O95571 254 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 BAG3O95817 575 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 APRTP07741 180 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 NR2C1P13056 603 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CD59P13987 128 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 NPR2P20594 1047 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 BGNP21810 368 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 S100A1P23297 94 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 GJB2P29033 226 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SHC1P29353 583 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SRD5A2P31213 254 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ACVR1BP36896 505 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 MAGEA2P43356 314 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 LIMK2P53671 638 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ATP1B3P54709 279 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 RAB4BP61018 213 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 MAGOHP61326 146 aaKnown RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CHRNB3Q05901 458 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF33BQ06732 778 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 IL10RBQ08334 325 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 C2orf54Q08AI8 447 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 IFFO1Q0D2I5 559 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ZP4Q12836 540 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 AQP6Q13520 282 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 EXOSC7Q15024 291 aaKnown RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 NDUFA5Q16718 116 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 PPP1R3AQ16821 1122 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 QRICH1Q2TAL8 776 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF699Q32M78 642 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 NDUFAF6Q330K2 333 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ACSF3Q4G176 576 aaPredicted RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SEL1L2Q5TEA6 688 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 AGAP7PQ5VUJ5 663 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SYPL2Q5VXT5 272 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 HIST2H2AA3Q6FI13 130 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SPOPLQ6IQ16 392 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 LINC00336Q6ZUF6 198 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 FCRLAQ7L513 359 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ERICH1Q86X53 443 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CACUL1Q86Y37 369 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 TGIF2LXQ8IUE1 241 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 METTL4Q8N3J2 472 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CCDC185Q8N715 623 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 TCEANCQ8N8B7 351 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 AQP11Q8NBQ7 271 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 OR2V1Q8NHB1 315 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 SETD7Q8WTS6 366 aaKnown RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 TMEM239Q8WW34 195 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 PIK3R3Q92569 461 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 RNF170Q96K19 258 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 B3GALT6Q96L58 329 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 C2orf48Q96LS8 159 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF578Q96N58 590 aaPredicted RBP2.94□□□□□ -1.94
CCDC58-203ENST00000466854 CSPG4P5Q96PW8 444 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 IL4I1Q96RQ9 567 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 MAP3K3Q99759 626 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 KLHDC3Q9BQ90 382 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 ZNF426Q9BUY5 554 aa2.94□□□□□ -1.94
CCDC58-203ENST00000466854 GBA3Q9H227 469 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms