RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 IQCF1Q8N6M8 205 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 NPEPL1Q8NDH3 523 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 SDR9C7Q8NEX9 313 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 OR52E2Q8NGJ4 325 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 ZNF837Q96EG3 531 aaPredicted RBP14.05□□□□□ -0.16
GPC1-207ENST00000466624 NMNAT3Q96T66 252 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 FOXB1Q99853 325 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 SYT4Q9H2B2 425 aa14.05□□□□□ -0.16
GPC1-207ENST00000466624 USP9YO00507 2555 aaPredicted RBP14.05□□□□□ -0.16
GPC1-207ENST00000466624 OR5H1A6NKK0 313 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 RIIAD1A6NNX1 92 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 E9PQ18 207 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 H7C1C5 153 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 SURF4O15260 269 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 RAD51DO75771 328 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 SLC2A10O95528 541 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 ATP6V1G2O95670 118 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 ZNF3P17036 446 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 PAX7P23759 505 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 LCN6P62502 163 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 ARF1P84077 181 aaKnown RBP14.04□□□□□ -0.16
GPC1-207ENST00000466624 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 C9orf135Q5VTT2 229 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 FOXL2NBQ6ZUU3 175 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 DMRTC2Q8IXT2 367 aaPredicted RBP14.04□□□□□ -0.16
GPC1-207ENST00000466624 SLC37A3Q8NCC5 494 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 BCL2L2Q92843 193 aaPredicted RBP14.04□□□□□ -0.16
GPC1-207ENST00000466624 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 SLC38A2Q96QD8 506 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 SPOCK3Q9BQ16 436 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 RACGAP1Q9H0H5 632 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 NELFAQ9H3P2 528 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 RIBC2Q9H4K1 309 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 OBP2BQ9NPH6 170 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 NDRG3Q9UGV2 375 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 FKBP7Q9Y680 259 aa14.04□□□□□ -0.16
GPC1-207ENST00000466624 ANKHD1Q8IWZ3 2542 aaKnown RBP14.04□□□□□ -0.16
GPC1-207ENST00000466624 IGKV1D-43A0A0B4J1Z2 117 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 OR6C68A6NDL8 312 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 KHDRBS3O75525 346 aaKnown RBP14.03□□□□□ -0.16
GPC1-207ENST00000466624 CTLA4P16410 223 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 NPR2P20594 1047 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 EPHA2P29317 976 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 MRPS34P82930 218 aaKnown RBP14.03□□□□□ -0.16
GPC1-207ENST00000466624 CRMP1Q14194 572 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 TMEM236Q5W0B7 351 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 C12orf73Q69YU5 71 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 ZBTB46Q86UZ6 589 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 CCDC36Q8IYA8 594 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 HSD17B8Q92506 261 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 DACH2Q96NX9 599 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 NMNAT2Q9BZQ4 307 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 NUAK2Q9H093 628 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 VCXQ9H320 206 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 FN3KQ9H479 309 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 SLC17A5Q9NRA2 495 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 TMEM38BQ9NVV0 291 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 SMPD3Q9NY59 655 aaPredicted RBP14.03□□□□□ -0.16
GPC1-207ENST00000466624 AMDHD2Q9Y303 409 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 UGT2A1Q9Y4X1 527 aa14.03□□□□□ -0.16
GPC1-207ENST00000466624 ARPC4-TTLL3A0A0A6YYG9 625 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 IGLV1-36A0A0B4J1U3 117 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 A1L4Q6 167 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 TUBAL3A6NHL2 446 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 SLC16A7O60669 478 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 PAICSP22234 425 aaKnown RBP14.02□□□□□ -0.17
GPC1-207ENST00000466624 HOXC12P31275 282 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 POLR2IP36954 125 aaKnown RBP14.02□□□□□ -0.17
GPC1-207ENST00000466624 SLC25A1P53007 311 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 TSC22D1Q15714 1073 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 LRRC36Q1X8D7 754 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 TBRG1Q3YBR2 411 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 ZNF813Q6ZN06 617 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 OR2T4Q8NH00 348 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 PLEKHA8Q96JA3 519 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 MBOAT4Q96T53 435 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 TOR3AQ9H497 397 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 MOV10Q9HCE1 1003 aaKnown RBP14.02□□□□□ -0.17
GPC1-207ENST00000466624 RPRD1BQ9NQG5 326 aaKnown RBP14.02□□□□□ -0.17
GPC1-207ENST00000466624 B9D1Q9UPM9 204 aa14.02□□□□□ -0.17
GPC1-207ENST00000466624 COL12A1Q99715 3063 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 SH3D21A4FU49 640 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 DLGAP1O14490 977 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 FARS2O95363 451 aaKnown RBP14.01□□□□□ -0.17
GPC1-207ENST00000466624 SNAP29O95721 258 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 OR8G3PP0DMU2 310 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 B4GALT1P15291 398 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 LAP3P28838 519 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 GUCA1AP43080 201 aaPredicted RBP14.01□□□□□ -0.17
GPC1-207ENST00000466624 CENPAP49450 140 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 EFNB1P98172 346 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 SNAPC1Q16533 368 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 DPPA2Q7Z7J5 298 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 OR6V1Q8N148 313 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 GALNT4Q8N4A0 578 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 SLC22A24Q8N4F4 322 aa14.01□□□□□ -0.17
GPC1-207ENST00000466624 CYB561A3Q8NBI2 242 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms