RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 HSH2DQ96JZ2 352 aa14.35□□□□□ -0.11
SDHB-203ENST00000466613 KCTD14Q9BQ13 255 aaPredicted RBP14.35□□□□□ -0.11
SDHB-203ENST00000466613 MRPL37Q9BZE1 423 aaKnown RBP14.35□□□□□ -0.11
SDHB-203ENST00000466613 TXNIPQ9H3M7 391 aa14.35□□□□□ -0.11
SDHB-203ENST00000466613 DYNLRB1Q9NP97 96 aa14.35□□□□□ -0.11
SDHB-203ENST00000466613 RHCGQ9UBD6 479 aa14.35□□□□□ -0.11
SDHB-203ENST00000466613 SLC7A8Q9UHI5 535 aa14.35□□□□□ -0.11
SDHB-203ENST00000466613 RTTNQ86VV8 2226 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 DNHD1Q96M86 4753 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 SH3PXD2BA1X283 911 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 FFAR1O14842 300 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 MGRN1O60291 552 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 IGHMP01871 453 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 SAGP10523 405 aaPredicted RBP14.34□□□□□ -0.11
SDHB-203ENST00000466613 NR2C1P13056 603 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 NR4A2P43354 598 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 PSME3P61289 254 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 PRKCDQ05655 676 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 FXNQ16595 210 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 FKBP9P1Q75LS8 142 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 ZCCHC24Q8N2G6 241 aaKnown RBP14.34□□□□□ -0.11
SDHB-203ENST00000466613 SLC30A7Q8NEW0 376 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 FAM162AQ96A26 154 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 NMD3Q96D46 503 aaKnown RBP14.34□□□□□ -0.11
SDHB-203ENST00000466613 C1orf198Q9H425 327 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 RNF121Q9H920 327 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
SDHB-203ENST00000466613 KIAA1324LA8MWY0 1029 aaPredicted RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 PRSS23O95084 383 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 SLC2A10O95528 541 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 IGFBP1P08833 259 aaPredicted RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 ADRA2AP08913 450 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 DAOP14920 347 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 MAKP20794 623 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 PRDX6P30041 224 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 TOP3AQ13472 1001 aaPredicted RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 GGTLC2Q14390 218 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 ANKDD1AQ495B1 522 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 CYB5R2Q6BCY4 276 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 HIPK1Q86Z02 1210 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 RNF113BQ8IZP6 322 aaKnown RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 LRRC75AQ8NAA5 344 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 FOXN4Q96NZ1 517 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 ALG12Q9BV10 488 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 FAM107BQ9H098 131 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 NSRP1Q9H0G5 558 aaKnown RBP14.33□□□□□ -0.12
SDHB-203ENST00000466613 MALRD1Q5VYJ5 2156 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 SVEP1Q4LDE5 3571 aa14.33□□□□□ -0.12
SDHB-203ENST00000466613 TRAV27A0A087WT01 109 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 A0A087WUU8 490 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 GMNCA6NCL1 334 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 M0R233 179 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 SYNGR3O43761 229 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 SNX3O60493 162 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 STAMBPO95630 424 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 PTHP01270 115 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 MMP7P09237 267 aaPredicted RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 IGHV4-31P0DP07 118 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 NCK1P16333 377 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 ZNF16P17020 682 aaPredicted RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 SLC9A3P48764 834 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 CTXN1P60606 82 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 RPL27P61353 136 aaKnown RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 MRPS34P82930 218 aaKnown RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 FMODQ06828 376 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 CD47Q08722 323 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 ZNF730Q6ZMV8 503 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 MBOAT2Q6ZWT7 520 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 MEX3DQ86XN8 651 aaKnown RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 LRRC18Q8N456 261 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 ZNF540Q8NDQ6 660 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 RBM15BQ8NDT2 890 aaKnown RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 OR51A7Q8NH64 312 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 SYT3Q9BQG1 590 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 BPESC1Q9GZL8 116 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 SIAEQ9HAT2 523 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 SPAG4Q9NPE6 437 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 RPS6KA6Q9UK32 745 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 ZNF346Q9UL40 294 aaKnown RBP14.32□□□□□ -0.12
SDHB-203ENST00000466613 UGT2A1Q9Y4X1 527 aa14.32□□□□□ -0.12
SDHB-203ENST00000466613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.31□□□□□ -0.124e-8■■■■■ 30.4
SDHB-203ENST00000466613 IGKV1D-43A0A0B4J1Z2 117 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 IGHV4-61A0A0C4DH41 118 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 IQCMA0A1B0GVH7 501 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 SLC22A23A1A5C7 686 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 EFCAB9A8MZ26 197 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 SNAP29O95721 258 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 CCL2P13500 99 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 DRD4P21917 467 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 GZMKP49863 264 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 PLP2Q04941 152 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 FHL1Q13642 323 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 TBC1D28Q2M2D7 210 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 IQCCQ4KMZ1 466 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 FAM205BPQ63HN1 556 aa14.31□□□□□ -0.12
SDHB-203ENST00000466613 RGS7BPQ6MZT1 257 aaPredicted RBP14.31□□□□□ -0.12
SDHB-203ENST00000466613 SLC25A47Q6Q0C1 308 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms