RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PPP1R3DO95685 299 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 IGKV3-15P01624 115 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 TP53P04637 393 aaPredicted RBP17.72■□□□□ 0.43
SKA3-205ENST00000465471 CD3EP07766 207 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 CD40P25942 277 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 TUBA1BP68363 451 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 TUBA4AP68366 448 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 CD47Q08722 323 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 FOXL2NBQ6ZUU3 175 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 TUBA1AQ71U36 451 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 ADCK1Q86TW2 530 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 SLC22A24Q8N4F4 322 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 LILRB1Q8NHL6 650 aaPredicted RBP17.72■□□□□ 0.43
SKA3-205ENST00000465471 FEVQ99581 238 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 NIPSNAP1Q9BPW8 284 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 PLA2G12AQ9BZM1 189 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 LIME1Q9H400 295 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 EGLN3Q9H6Z9 239 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 VSX1Q9NZR4 365 aaPredicted RBP17.72■□□□□ 0.43
SKA3-205ENST00000465471 AP4S1Q9Y587 144 aa17.72■□□□□ 0.43
SKA3-205ENST00000465471 H7C1C5 153 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 ARHGEF9O43307 516 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 CBR1P16152 277 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 GSTM3P21266 225 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 ZNF84P51523 738 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 LCN6P62502 163 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 MRPS34P82930 218 aaKnown RBP17.71■□□□□ 0.43
SKA3-205ENST00000465471 ATP6AP1Q15904 470 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 PAMR1Q6UXH9 720 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 PTCHD4Q6ZW05 846 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 OR8D4Q8NGM9 314 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 GTPBP3Q969Y2 492 aaKnown RBP17.71■□□□□ 0.43
SKA3-205ENST00000465471 NABP1Q96AH0 204 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 NRBF2Q96F24 287 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 ZNF75AQ96N20 296 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 RBP7Q96R05 134 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 C1QTNF6Q9BXI9 259 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 NOX3Q9HBY0 568 aa17.71■□□□□ 0.43
SKA3-205ENST00000465471 IGHV1-18A0A0C4DH31 117 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SHISA9B4DS77 424 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 M0R1B8 84 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 BHLHE40O14503 412 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 XKRYO14609 159 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 ABCD4O14678 606 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 IDH3BO43837 385 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 MGRN1O60291 552 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 ENTPD5O75356 428 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 E2F6O75461 281 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 HLA-HP01893 362 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 OR8G3PP0DMU2 310 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SPOCK1Q08629 439 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 COX10Q12887 443 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SHQ1Q6PI26 577 aaKnown RBP17.7■□□□□ 0.42
SKA3-205ENST00000465471 CDH24Q86UP0 819 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 MDP1Q86V88 176 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SKA3Q8IX90 412 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 HS3ST5Q8IZT8 346 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 KBTBD8Q8NFY9 601 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 ERMAPQ96PL5 475 aaPredicted RBP17.7■□□□□ 0.42
SKA3-205ENST00000465471 SLC38A2Q96QD8 506 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SNX18Q96RF0 628 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 IFT27Q9BW83 186 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 DENND2DQ9H6A0 471 aaPredicted RBP17.7■□□□□ 0.42
SKA3-205ENST00000465471 PDP1Q9P0J1 537 aaPredicted RBP17.7■□□□□ 0.42
SKA3-205ENST00000465471 PLCE1Q9P212 2302 aa17.7■□□□□ 0.42
SKA3-205ENST00000465471 SOCS2O14508 198 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 ARR3P36575 388 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 CDKN2AP42771 156 aaKnown RBP17.69■□□□□ 0.42
SKA3-205ENST00000465471 KPNB1Q14974 876 aaKnown RBP17.69■□□□□ 0.42
SKA3-205ENST00000465471 MYPOPQ86VE0 399 aaPredicted RBP17.69■□□□□ 0.42
SKA3-205ENST00000465471 OR52L1Q8NGH7 329 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 FGFBP3Q8TAT2 258 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 NANOS1Q8WY41 292 aaKnown RBP17.69■□□□□ 0.42
SKA3-205ENST00000465471 HTRA1Q92743 480 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 RADILQ96JH8 1075 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 SIAEQ9HAT2 523 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 REV1Q9UBZ9 1251 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 ST6GALNAC2Q9UJ37 374 aa17.69■□□□□ 0.42
SKA3-205ENST00000465471 AKAP9Q99996 3911 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 HS3ST1O14792 307 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 UBL3O95164 117 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 FARS2O95363 451 aaKnown RBP17.68■□□□□ 0.42
SKA3-205ENST00000465471 IGFBP1P08833 259 aaPredicted RBP17.68■□□□□ 0.42
SKA3-205ENST00000465471 CECR9P0C854 216 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 FCGR1AP12314 374 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 CTLA4P16410 223 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 NPR2P20594 1047 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 FASP25445 335 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 CDAP32320 146 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 GSG1Q2KHT4 349 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 ZNF672Q499Z4 452 aaPredicted RBP17.68■□□□□ 0.42
SKA3-205ENST00000465471 DPPA2Q7Z7J5 298 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 NSMAFQ92636 917 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 AKAP1Q92667 903 aaKnown RBP eCLIP17.68■□□□□ 0.42
SKA3-205ENST00000465471 NINJ1Q92982 152 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 SYT4Q9H2B2 425 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 SEC61A2Q9H9S3 476 aa17.68■□□□□ 0.42
SKA3-205ENST00000465471 ATE1O95260 518 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 SOX14O95416 240 aa17.67■□□□□ 0.42
SKA3-205ENST00000465471 CELA3BP08861 270 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms