RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 EFCAB1Q9HAE3 211 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 RHCGQ9UBD6 479 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 HIF3AQ9Y2N7 669 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 SNX13Q9Y5W8 968 aa22.27■■□□□ 1.16
U2AF1-206ENST00000464750 NPIPB13A6NJU9 1138 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 NPIPB4C9JG80 1138 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 J3KTA2 159 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 M0R233 179 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 APEHP13798 732 aaKnown RBP22.26■■□□□ 1.15
U2AF1-206ENST00000464750 GSK3BP49841 420 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 NUDT2P50583 147 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 ZNF133P52736 654 aaPredicted RBP22.26■■□□□ 1.15
U2AF1-206ENST00000464750 TOP3AQ13472 1001 aaPredicted RBP22.26■■□□□ 1.15
U2AF1-206ENST00000464750 LAPTM4AQ15012 233 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 IFI44LQ53G44 452 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 ALG10Q5BKT4 473 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 C10orf128Q5T292 105 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 SLC30A7Q8NEW0 376 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 HDAC2Q92769 488 aaKnown RBP22.26■■□□□ 1.15
U2AF1-206ENST00000464750 KCNK17Q96T54 332 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 MDFIQ99750 246 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 FNDC11Q9BVV2 318 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 MAN2C1Q9NTJ4 1040 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 FZR1Q9UM11 496 aa22.26■■□□□ 1.15
U2AF1-206ENST00000464750 HTR3EA5X5Y0 456 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 SYNGR3O43761 229 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 SLC2A10O95528 541 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 CD47Q08722 323 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 TRAM2Q15035 370 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 HACD2Q6Y1H2 254 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 CBLL1Q75N03 491 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 NRMQ8IXM6 262 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 ZNF540Q8NDQ6 660 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 RBM15BQ8NDT2 890 aaKnown RBP22.25■■□□□ 1.15
U2AF1-206ENST00000464750 HSH2DQ96JZ2 352 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 TXNIPQ9H3M7 391 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 C1orf198Q9H425 327 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 CDH20Q9HBT6 801 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 REV1Q9UBZ9 1251 aa22.25■■□□□ 1.15
U2AF1-206ENST00000464750 SERPINA1P01009 418 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 SAGP10523 405 aaPredicted RBP22.24■■□□□ 1.15
U2AF1-206ENST00000464750 CCL2P13500 99 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 MAKP20794 623 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 FMODQ06828 376 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 LRP11Q86VZ4 500 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 MEX3DQ86XN8 651 aaKnown RBP22.24■■□□□ 1.15
U2AF1-206ENST00000464750 LRRC18Q8N456 261 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 PAQR4Q8N4S7 273 aaPredicted RBP22.24■■□□□ 1.15
U2AF1-206ENST00000464750 NMD3Q96D46 503 aaKnown RBP22.24■■□□□ 1.15
U2AF1-206ENST00000464750 SMURF2Q9HAU4 748 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 TMEM160Q9NX00 188 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 MYEF2Q9P2K5 600 aaKnown RBP22.24■■□□□ 1.15
U2AF1-206ENST00000464750 CDC42EP3Q9UKI2 254 aa22.24■■□□□ 1.15
U2AF1-206ENST00000464750 FFAR1O14842 300 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 FAM157BP0CG42 384 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 NR2C1P13056 603 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 ZNF23P17027 643 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 GIFP27352 417 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 ALDH3B1P43353 468 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 MAD2L1BPQ15013 274 aaPredicted RBP22.23■■□□□ 1.15
U2AF1-206ENST00000464750 TAF11Q15544 211 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 FKBP9P1Q75LS8 142 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 IGFN1Q86VF2 1251 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 ZNF786Q8N393 782 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 UBASH3BQ8TF42 649 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 FAM162AQ96A26 154 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 KCTD14Q9BQ13 255 aaPredicted RBP22.23■■□□□ 1.15
U2AF1-206ENST00000464750 ELAC2Q9BQ52 826 aaKnown RBP22.23■■□□□ 1.15
U2AF1-206ENST00000464750 UGT2A1Q9Y4X1 527 aa22.23■■□□□ 1.15
U2AF1-206ENST00000464750 TRAV27A0A087WT01 109 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 IGKV1D-43A0A0B4J1Z2 117 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 A0A1W2PPW3 197 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 NDUFAB1O14561 156 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 IGHMP01871 453 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 MMP7P09237 267 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-206ENST00000464750 CDAP32320 146 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 MRPS34P82930 218 aaKnown RBP22.22■■□□□ 1.15
U2AF1-206ENST00000464750 PLP2Q04941 152 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 TBC1D28Q2M2D7 210 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 RGS7BPQ6MZT1 257 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-206ENST00000464750 ACOT11Q8WXI4 607 aaPredicted RBP22.22■■□□□ 1.15
U2AF1-206ENST00000464750 NSMAFQ92636 917 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 ALG12Q9BV10 488 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 OR51B6Q9H340 312 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 MS4A5Q9H3V2 200 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 ABCD2Q9UBJ2 740 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 DUSP13Q9UII6 198 aa22.22■■□□□ 1.15
U2AF1-206ENST00000464750 CUBNO60494 3623 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 IQCMA0A1B0GVH7 501 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 SLC22A23A1A5C7 686 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 GMNCA6NCL1 334 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 EFCAB9A8MZ26 197 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 MGRN1O60291 552 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 LMX1BO60663 402 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 PRSS23O95084 383 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 PTHP01270 115 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 IFNA2P01563 188 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 NCK1P16333 377 aa22.21■■□□□ 1.15
U2AF1-206ENST00000464750 TCN1P20061 433 aaPredicted RBP22.21■■□□□ 1.15
U2AF1-206ENST00000464750 SEC24CP53992 1094 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms