RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 ACHEP22303 614 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 CDAP32320 146 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 LSP1P33241 339 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 DVL1P1P54792 670 aaPredicted RBP12.4□□□□□ -0.42
ALMS1-202ENST00000464408 GLO1Q04760 184 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 FMODQ06828 376 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.42
ALMS1-202ENST00000464408 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 TMEM255AQ5JRV8 349 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 INTS11Q5TA45 600 aaKnown RBP12.4□□□□□ -0.42
ALMS1-202ENST00000464408 TMEM53Q6P2H8 277 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 SLC16A14Q7RTX9 510 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 ICA1LQ8NDH6 482 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 TSPEARQ8WU66 669 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 TMEM120AQ9BXJ8 343 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 CDH20Q9HBT6 801 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 FBXL3Q9UKT7 428 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
ALMS1-202ENST00000464408 IGLV3-9A0A075B6K5 115 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 MCIDASD6RGH6 385 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 PPIHO43447 177 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 FARS2O95363 451 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 LCKP06239 509 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 TAS2R41P59536 307 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 CCL8P80075 99 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 HNRNPA0Q13151 305 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 AVPI1Q5T686 147 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 REP15Q6BDI9 236 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 MEX3DQ86XN8 651 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 CLDN22Q8N7P3 220 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 RBM15BQ8NDT2 890 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 CPEB3Q8NE35 698 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 HDAC2Q92769 488 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 LRRC58Q96CX6 371 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 NMD3Q96D46 503 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 SGTBQ96EQ0 304 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 GMPR2Q9P2T1 348 aaKnown RBP12.39□□□□□ -0.43
ALMS1-202ENST00000464408 RIMS3Q9UJD0 308 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
ALMS1-202ENST00000464408 A0A1W2PRG6 482 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 B4DSR2 109 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 SASH3O75995 380 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 TSPAN19P0C672 248 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 GAAP10253 952 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF250P15622 560 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 ACADSP16219 412 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 KLF3P57682 345 aaPredicted RBP12.38□□□□□ -0.43
ALMS1-202ENST00000464408 LMO4P61968 165 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 CYLC2Q14093 348 aaPredicted RBP12.38□□□□□ -0.43
ALMS1-202ENST00000464408 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 TBC1D28Q2M2D7 210 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 SLC36A2Q495M3 483 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 SPATA46Q5T0L3 261 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 C10orf128Q5T292 105 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 CGB2Q6NT52 195 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 GLCCI1Q86VQ1 547 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 SYNPRQ8TBG9 265 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 TMEM239Q8WW34 195 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 NSMAFQ92636 917 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF583Q96ND8 569 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 HINT3Q9NQE9 182 aaKnown RBP12.38□□□□□ -0.43
ALMS1-202ENST00000464408 INIPQ9NRY2 104 aa12.38□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF346Q9UL40 294 aaKnown RBP12.38□□□□□ -0.43
ALMS1-202ENST00000464408 MRASO14807 208 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 TCF21O43680 179 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 MGRN1O60291 552 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 RGS9O75916 674 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 OR5F1O95221 314 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 SNAP29O95721 258 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 MSMBP08118 114 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF32P17041 273 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 CCNOP22674 350 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 RBMXP38159 391 aaKnown RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 WNT5AP41221 380 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 DAP3P51398 398 aaKnown RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF84P51523 738 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 UCP2P55851 309 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 MVKQ03426 396 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 TOP3AQ13472 1001 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 CYBRD1Q53TN4 286 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 LIPNQ5VXI9 398 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 HDXQ7Z353 690 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 IGFN1Q86VF2 1251 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF101Q8IZC7 436 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 RFLNBQ8N5W9 214 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.37□□□□□ -0.43
ALMS1-202ENST00000464408 OR8J3Q8NGG0 315 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 AKR7LQ8NHP1 331 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 ZNF519Q8TB69 540 aa12.37□□□□□ -0.43
ALMS1-202ENST00000464408 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms