RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CCKBRP32239 447 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 NR0B1P51843 470 aaKnown RBP11.25□□□□□ -0.61
COL4A6-204ENST00000461897 EXOSC2Q13868 293 aaKnown RBP11.25□□□□□ -0.61
COL4A6-204ENST00000461897 CD226Q15762 336 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 RNASE12Q5GAN4 147 aaKnown RBP11.25□□□□□ -0.61
COL4A6-204ENST00000461897 APOOLQ6UXV4 268 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 OR52I2Q8NH67 350 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 MAP6Q96JE9 813 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 RBP7Q96R05 134 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 NMNAT3Q96T66 252 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 WDR77Q9BQA1 342 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-204ENST00000461897 TMPRSS13Q9BYE2 586 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 SEMA4CQ9C0C4 833 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 UBQLN4Q9NRR5 601 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 KCNN3Q9UGI6 736 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 UBQLN2Q9UHD9 624 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 FOXJ3Q9UPW0 622 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
COL4A6-204ENST00000461897 ADAM18Q9Y3Q7 739 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 FKBP7Q9Y680 259 aa11.25□□□□□ -0.61
COL4A6-204ENST00000461897 ARPC4-TTLL3A0A0A6YYG9 625 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 TRBV5-5A0A0J9YX44 114 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 IMPA2O14732 288 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 UTS2O95399 124 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 TXNDC12O95881 172 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 GIPP09681 153 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-204ENST00000461897 IFNGR1P15260 489 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 C4BPBP20851 252 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 LCN1P31025 176 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 SELENOPP49908 381 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF81P51508 661 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 EMP2P54851 167 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 NANOS3P60323 173 aaKnown RBP11.24□□□□□ -0.61
COL4A6-204ENST00000461897 TMEM255AQ5JRV8 349 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 FAM69BQ5VUD6 431 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 HLA-DQA1Q5Y7H0 255 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 GLDNQ6ZMI3 551 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-204ENST00000461897 LINGO2Q7L985 606 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 NAXDQ8IW45 347 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF440Q8IYI8 595 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 GATSQ8NAP1 163 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 MIB2Q96AX9 1013 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 ADOQ96SZ5 270 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 CRB3Q9BUF7 120 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 TTTY10Q9BZA0 68 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 CCDC86Q9H6F5 360 aaKnown RBP11.24□□□□□ -0.61
COL4A6-204ENST00000461897 TAS2R5Q9NYW4 299 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 PIPOXQ9P0Z9 390 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 OR5V1Q9UGF6 321 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 PPIEQ9UNP9 301 aaKnown RBP11.24□□□□□ -0.61
COL4A6-204ENST00000461897 MOKQ9UQ07 419 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 SLC6A5Q9Y345 797 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 FREM2Q5SZK8 3169 aa11.24□□□□□ -0.61
COL4A6-204ENST00000461897 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ZSCAN5BA6NJL1 495 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 PRR32B1ATL7 298 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ACOT7O00154 380 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OIP5O43482 229 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 TSPAN2O60636 221 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ICOSLGO75144 302 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OR2A4O95047 310 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ZFPL1O95159 310 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ABHD16AO95870 558 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ZNF806P0C7X5 589 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 RRASP10301 218 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ABCD3P28288 659 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 PSMB10P40306 273 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ADH7P40394 386 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 BLVRAP53004 296 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 RNF4P78317 190 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 PAPD4Q6PIY7 484 aaKnown RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 FAM198BQ6UWH4 519 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 Q6ZTK2 550 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 FCRLAQ7L513 359 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 SLC16A9Q7RTY1 509 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 FAM122BQ7Z309 247 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OR51L1Q8NGJ5 315 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ZPLD1Q8TCW7 415 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 FCAMRQ8WWV6 532 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OR2A7Q96R45 310 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 EDEM2Q9BV94 578 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 DPCDQ9BVM2 203 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-204ENST00000461897 ULBP3Q9BZM4 244 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 EXPH5Q8NEV8 1989 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 LOC105371267A0A1B0GV96 52 aa11.23□□□□□ -0.61
COL4A6-204ENST00000461897 OR6C65A6NJZ3 312 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms