RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CCDC22O60826 627 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 FAM157CP0CG43 387 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 IFNA8P32881 189 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 LIPEQ05469 1076 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 SLC36A2Q495M3 483 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 C10orf128Q5T292 105 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 CXXC5Q7LFL8 322 aaKnown RBP16.29■□□□□ 0.2
VARS-220ENST00000461874 VTCN1Q7Z7D3 282 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 LRP11Q86VZ4 500 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 SLC30A7Q8NEW0 376 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 MSI2Q96DH6 328 aaKnown RBP16.29■□□□□ 0.2
VARS-220ENST00000461874 BEX2Q9BXY8 128 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 TXNIPQ9H3M7 391 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 TPK1Q9H3S4 243 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 MS4A5Q9H3V2 200 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 RNF121Q9H920 327 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 LPAR3Q9UBY5 353 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 HIF3AQ9Y2N7 669 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 SNX13Q9Y5W8 968 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 MXRA5Q9NR99 2828 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 CUBNO60494 3623 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 SVEP1Q4LDE5 3571 aa16.29■□□□□ 0.2
VARS-220ENST00000461874 LOC100289279A0A1B0GTE1 492 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 MGRN1O60291 552 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 IFI30P13284 250 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 FUT4P22083 530 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 YAP1P46937 504 aaKnown RBP16.28■□□□□ 0.2
VARS-220ENST00000461874 FAM166AQ6J272 317 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 PAQR4Q8N4S7 273 aaPredicted RBP16.28■□□□□ 0.2
VARS-220ENST00000461874 HDAC2Q92769 488 aaKnown RBP16.28■□□□□ 0.2
VARS-220ENST00000461874 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
VARS-220ENST00000461874 BPIFA2Q96DR5 249 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 HOPXQ9BPY8 73 aaPredicted RBP16.28■□□□□ 0.2
VARS-220ENST00000461874 C1orf198Q9H425 327 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 SMURF2Q9HAU4 748 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 MAN2C1Q9NTJ4 1040 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 FZR1Q9UM11 496 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.28■□□□□ 0.23e-7■■□□□ 14.4
VARS-220ENST00000461874 STAB1Q9NY15 2570 aa16.28■□□□□ 0.2
VARS-220ENST00000461874 SLC22A23A1A5C7 686 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 CXCR6O00574 342 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 SLC2A10O95528 541 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 PTHP01270 115 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 IFNW1P05000 195 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 MMP7P09237 267 aaPredicted RBP16.27■□□□□ 0.2
VARS-220ENST00000461874 TACSTD2P09758 323 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 CCL2P13500 99 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 ALDH3B1P43353 468 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 SLC7A2P52569 658 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 SEC24CP53992 1094 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 MRPS34P82930 218 aaKnown RBP16.27■□□□□ 0.2
VARS-220ENST00000461874 RIN1Q13671 783 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 TAF11Q15544 211 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 ALG10Q5BKT4 473 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.2
VARS-220ENST00000461874 OFCC1Q8IZS5 231 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 LRRC18Q8N456 261 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 ARIH2OSQ8N7S6 290 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 RBM15BQ8NDT2 890 aaKnown RBP16.27■□□□□ 0.2
VARS-220ENST00000461874 FNDC11Q9BVV2 318 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 SHARPINQ9H0F6 387 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 EFCAB1Q9HAE3 211 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 SIAEQ9HAT2 523 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 MYEF2Q9P2K5 600 aaKnown RBP16.27■□□□□ 0.2
VARS-220ENST00000461874 RHCGQ9UBD6 479 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 DUSP13Q9UII6 198 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 KCNS2Q9ULS6 477 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 UGT2A1Q9Y4X1 527 aa16.27■□□□□ 0.2
VARS-220ENST00000461874 IGKV1D-43A0A0B4J1Z2 117 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 LRP5LA4QPB2 252 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 LYNX1G3V0Z9 82 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 J3KTA2 159 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 NME4O00746 187 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 FFAR1O14842 300 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 LILRA1O75019 489 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 SNAP29O95721 258 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 ZNF682O95780 498 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 FAM157BP0CG42 384 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 LYNX1P0DP58 116 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 TCN1P20061 433 aaPredicted RBP16.26■□□□□ 0.19
VARS-220ENST00000461874 MAKP20794 623 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 IGFBP5P24593 272 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 PLP2Q04941 152 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 MAD2L1BPQ15013 274 aaPredicted RBP16.26■□□□□ 0.19
VARS-220ENST00000461874 TRAM2Q15035 370 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 RGS7BPQ6MZT1 257 aaPredicted RBP16.26■□□□□ 0.19
VARS-220ENST00000461874 HACD2Q6Y1H2 254 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 CBLL1Q75N03 491 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 TREML1Q86YW5 311 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 NRMQ8IXM6 262 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 OR1J2Q8NGS2 313 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 SPATA3Q8NHX4 192 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 GEMIN6Q8WXD5 167 aaKnown RBP16.26■□□□□ 0.19
VARS-220ENST00000461874 SOX7Q9BT81 388 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 CDH20Q9HBT6 801 aa16.26■□□□□ 0.19
VARS-220ENST00000461874 IQCMA0A1B0GVH7 501 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 GSTA4O15217 222 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 TGFAP01135 160 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 NR2C1P13056 603 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 CDAP32320 146 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms