RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PCYOX1LQ8NBM8 494 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 C1orf159Q96HA4 380 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ZNF583Q96ND8 569 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 ZNF347Q96SE7 839 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 RNF121Q9H920 327 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 CDH20Q9HBT6 801 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 SAR1AQ9NR31 198 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 INIPQ9NRY2 104 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 C20orf141Q9NUB4 165 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 MYEF2Q9P2K5 600 aaKnown RBP19.55■□□□□ 0.72
PTPN4-207ENST00000460162 RIMS3Q9UJD0 308 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 FZR1Q9UM11 496 aa19.55■□□□□ 0.72
PTPN4-207ENST00000460162 LYNX1G3V0Z9 82 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 TSPAN19P0C672 248 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 LYNX1P0DP58 116 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 ACADSP16219 412 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 MRPS11P82912 194 aaKnown RBP19.54■□□□□ 0.72
PTPN4-207ENST00000460162 RUNX1T1Q06455 604 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 PIN1Q13526 163 aaPredicted RBP19.54■□□□□ 0.72
PTPN4-207ENST00000460162 MAD2L1BPQ15013 274 aaPredicted RBP19.54■□□□□ 0.72
PTPN4-207ENST00000460162 TBC1D28Q2M2D7 210 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 KRTAP24-1Q3LI83 254 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 LRRC23Q53EV4 343 aaPredicted RBP19.54■□□□□ 0.72
PTPN4-207ENST00000460162 C10orf128Q5T292 105 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 LRP11Q86VZ4 500 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 RBM15BQ8NDT2 890 aaKnown RBP19.54■□□□□ 0.72
PTPN4-207ENST00000460162 RDH5Q92781 318 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 SMURF2Q9HAU4 748 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 FGFR1OP2Q9NVK5 253 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 DUSP13Q9UII6 198 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 MED31Q9Y3C7 131 aa19.54■□□□□ 0.72
PTPN4-207ENST00000460162 HPXP02790 462 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 NR2C1P13056 603 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 AQP2P41181 271 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 OR1E2P47887 323 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 SEC24CP53992 1094 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 MYBPC1Q00872 1141 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 CYBRD1Q53TN4 286 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 PAQR4Q8N4S7 273 aaPredicted RBP19.53■□□□□ 0.72
PTPN4-207ENST00000460162 OR1J2Q8NGS2 313 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 C10orf82Q8WW14 230 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 GID8Q9NWU2 228 aa19.53■□□□□ 0.72
PTPN4-207ENST00000460162 IGLV3-9A0A075B6K5 115 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 IQCMA0A1B0GVH7 501 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 GMNCA6NCL1 334 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 SHOX2O60902 331 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-207ENST00000460162 TRMUO75648 421 aaKnown RBP19.52■□□□□ 0.72
PTPN4-207ENST00000460162 FAM157BP0CG42 384 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 TCN1P20061 433 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-207ENST00000460162 GPR6P46095 362 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-207ENST00000460162 KLF3P57682 345 aaPredicted RBP19.52■□□□□ 0.72
PTPN4-207ENST00000460162 SELENOVP59797 346 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 PLP2Q04941 152 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 NKPD1Q17RQ9 610 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 ARMC4Q5T2S8 1044 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 CGB2Q6NT52 195 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 SYT14Q8NB59 555 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 OR2T12Q8NG77 320 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 PRRC1Q96M27 445 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 BCL2L14Q9BZR8 327 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 LRMDAQ9H2I8 198 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 GPR160Q9UJ42 338 aa19.52■□□□□ 0.72
PTPN4-207ENST00000460162 HTR3EA5X5Y0 456 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 NCR1O76036 304 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 MMP7P09237 267 aaPredicted RBP19.51■□□□□ 0.71
PTPN4-207ENST00000460162 NAT2P11245 290 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 CCL2P13500 99 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 ZNF250P15622 560 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 PCMT1P22061 227 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 KDELR2P33947 212 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 DVL1P1P54792 670 aaPredicted RBP19.51■□□□□ 0.71
PTPN4-207ENST00000460162 MRPS34P82930 218 aaKnown RBP19.51■□□□□ 0.71
PTPN4-207ENST00000460162 CCNIQ14094 377 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 MOSPD2Q8NHP6 518 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 ZNF519Q8TB69 540 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 SNX33Q8WV41 574 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 HIF3AQ9Y2N7 669 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 CAPN7Q9Y6W3 813 aa19.51■□□□□ 0.71
PTPN4-207ENST00000460162 SLC22A2O15244 555 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 IFNA8P32881 189 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 RAD52P43351 418 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 ST3GAL3Q11203 375 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 TAF11Q15544 211 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 SYNPRQ8TBG9 265 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 NMD3Q96D46 503 aaKnown RBP19.5■□□□□ 0.71
PTPN4-207ENST00000460162 ZNF416Q9BWM5 594 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 KCNN2Q9H2S1 579 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 TXNIPQ9H3M7 391 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 SIAEQ9HAT2 523 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 SLCO1C1Q9NYB5 712 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 TAAR3PQ9P1P4 343 aa19.5■□□□□ 0.71
PTPN4-207ENST00000460162 TMEFF2Q9UIK5 374 aaPredicted RBP19.5■□□□□ 0.71
PTPN4-207ENST00000460162 LOC100653049A0A140TA62 436 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 B4DSR2 109 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 PIP5K1CO60331 668 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 KRT34O76011 436 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 SLC2A10O95528 541 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 TFP02787 698 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 LCKP06239 509 aa19.49■□□□□ 0.71
PTPN4-207ENST00000460162 SAGP10523 405 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms