RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TBPL2Q6SJ96 375 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 C16orf89Q6UX73 402 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 DPPA2Q7Z7J5 298 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 FGFBP3Q8TAT2 258 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 NSMAFQ92636 917 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF75AQ96N20 296 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 KCNN2Q9H2S1 579 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 NMNAT1Q9HAN9 279 aaPredicted RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 DCAF13Q9NV06 445 aaKnown RBP14.03□□□□□ -0.16
CPSF6-203ENST00000456847 TMEM5Q9Y2B1 443 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 CMAHPQ9Y471 501 aa14.03□□□□□ -0.16
CPSF6-203ENST00000456847 IGHMP01871 453 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 NR4A1P22736 598 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 RPL4P36578 427 aaKnown RBP14.02□□□□□ -0.16
CPSF6-203ENST00000456847 FMODQ06828 376 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 KRT72Q14CN4 511 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 ANKDD1AQ495B1 522 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 C10orf128Q5T292 105 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 FAM205BPQ63HN1 556 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 LRRC18Q8N456 261 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 ANKS4BQ8N8V4 417 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 SEPHS2Q99611 448 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 NDE1Q9NXR1 346 aa14.02□□□□□ -0.16
CPSF6-203ENST00000456847 FBXO9Q9UK97 447 aaPredicted RBP14.02□□□□□ -0.16
CPSF6-203ENST00000456847 ZNF346Q9UL40 294 aaKnown RBP14.02□□□□□ -0.16
CPSF6-203ENST00000456847 F12P00748 615 aaPredicted RBP14.02□□□□□ -0.17
CPSF6-203ENST00000456847 ERCC1P07992 297 aaPredicted RBP14.02□□□□□ -0.17
CPSF6-203ENST00000456847 SLC25A16P16260 332 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 RHCEP18577 417 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 PPOXP50336 477 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
CPSF6-203ENST00000456847 FAM86B1Q8N7N1 296 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 FAM46AQ96IP4 442 aaKnown RBP14.02□□□□□ -0.17
CPSF6-203ENST00000456847 TNFRSF13CQ96RJ3 184 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 CDRT15Q96T59 188 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 ALG12Q9BV10 488 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 SMURF2Q9HAU4 748 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 CDH20Q9HBT6 801 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 CCNB1IP1Q9NPC3 277 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 KRCC1Q9NPI7 259 aaPredicted RBP14.02□□□□□ -0.17
CPSF6-203ENST00000456847 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.17
CPSF6-203ENST00000456847 SETD2Q9BYW2 2564 aaPredicted RBP14.01□□□□□ -0.17
CPSF6-203ENST00000456847 SH3PXD2BA1X283 911 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 A6NIZ1 184 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 GPRIN2O60269 458 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 DIRAS1O95057 198 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 SERPINA5P05154 406 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF35P13682 527 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 HSD17B1P14061 328 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 CDAP32320 146 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 PDLIM4P50479 330 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 RAP1BP61224 184 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 RAP1AP62834 184 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 HSF2Q03933 536 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 PLP2Q04941 152 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 NRN1LQ496H8 165 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 PODNL1Q6PEZ8 512 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 DEFB107AQ8IZN7 70 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 SLC30A7Q8NEW0 376 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 OR10H5Q8NGA6 315 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 NSMCE2Q96MF7 247 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 TSPAN32Q96QS1 320 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 RBP7Q96R05 134 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 KCNK17Q96T54 332 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 C1orf198Q9H425 327 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 GORASP2Q9H8Y8 452 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 NDUFAF4Q9P032 175 aa14.01□□□□□ -0.17
CPSF6-203ENST00000456847 IQCMA0A1B0GVH7 501 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 INAFM1C9JVW0 142 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 DYNC1I1O14576 645 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 PTHP01270 115 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 ITGA2P17301 1181 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 MSX2P35548 267 aaPredicted RBP14□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF133P52736 654 aaPredicted RBP14□□□□□ -0.17
CPSF6-203ENST00000456847 VLDLRP98155 873 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 SGCAQ16586 387 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 TBC1D28Q2M2D7 210 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 TMPRSS11FQ6ZWK6 438 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 TSEN54Q7Z6J9 526 aaKnown RBP14□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF584Q8IVC4 421 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 LRRC75AQ8NAA5 344 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 FNDC8Q8TC99 324 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 SLC7A13Q8TCU3 470 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 C10orf105Q8TEF2 133 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 MCUR1Q96AQ8 359 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 AURKCQ9UQB9 309 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 A0A1W2PRQ8 180 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 CDC42EP2O14613 210 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 ARPC2O15144 300 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 ERVK-25P63136 954 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 MRPS34P82930 218 aaKnown RBP14□□□□□ -0.17
CPSF6-203ENST00000456847 SPIBQ01892 262 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 DGCR6Q14129 220 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 ZBED5Q49AG3 693 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 CLDN22Q8N7P3 220 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 OR52J3Q8NH60 311 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 ZNF519Q8TB69 540 aa14□□□□□ -0.17
CPSF6-203ENST00000456847 MRPL24Q96A35 216 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms