RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 PLP2Q04941 152 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 RUNX1T1Q06455 604 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 LAPTM4AQ15012 233 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 HIST3H3Q16695 136 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 NRN1LQ496H8 165 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 ZNF786Q8N393 782 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 LIPHQ8WWY8 451 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 ASB10Q8WXI3 467 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 MRPL13Q9BYD1 178 aaKnown RBP11.1□□□□□ -0.63
CHD3-206ENST00000452447 LRMDAQ9H2I8 198 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 CHODLQ9H9P2 273 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 DUSP13Q9UII6 198 aa11.1□□□□□ -0.63
CHD3-206ENST00000452447 IQCMA0A1B0GVH7 501 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 HTR3EA5X5Y0 456 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 MGRN1O60291 552 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 NR2C1P13056 603 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 COX4I1P13073 169 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 SELENOVP59797 346 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 CD47Q08722 323 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 FXNQ16595 210 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 MSMPQ1L6U9 139 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 ALG10Q5BKT4 473 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 RGS7BPQ6MZT1 257 aaPredicted RBP11.09□□□□□ -0.63
CHD3-206ENST00000452447 CXXC5Q7LFL8 322 aaKnown RBP11.09□□□□□ -0.63
CHD3-206ENST00000452447 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 LRRC18Q8N456 261 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 RBM15BQ8NDT2 890 aaKnown RBP11.09□□□□□ -0.63
CHD3-206ENST00000452447 OR1J2Q8NGS2 313 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 MOSPD2Q8NHP6 518 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 MSI2Q96DH6 328 aaKnown RBP11.09□□□□□ -0.63
CHD3-206ENST00000452447 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
CHD3-206ENST00000452447 FNDC11Q9BVV2 318 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 CMTM6Q9NX76 183 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 A4GNTQ9UNA3 340 aa11.09□□□□□ -0.63
CHD3-206ENST00000452447 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 NPIPB13A6NJU9 1138 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 NPIPB4C9JG80 1138 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 GSTA4O15217 222 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 ZNF682O95780 498 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 TGFAP01135 160 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 IFNW1P05000 195 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 TSPAN19P0C672 248 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 FAM157BP0CG42 384 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 SAGP10523 405 aaPredicted RBP11.08□□□□□ -0.64
CHD3-206ENST00000452447 IFI30P13284 250 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 CCL2P13500 99 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
CHD3-206ENST00000452447 ALDH3B1P43353 468 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 YAP1P46937 504 aaKnown RBP11.08□□□□□ -0.64
CHD3-206ENST00000452447 CHN2P52757 468 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 LIPEQ05469 1076 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 TBC1D28Q2M2D7 210 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 ARMC4Q5T2S8 1044 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 VTCN1Q7Z7D3 282 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 LRP11Q86VZ4 500 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 BPIFA2Q96DR5 249 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 SEPHS2Q99611 448 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 EFCAB1Q9HAE3 211 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 SMURF2Q9HAU4 748 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 ZNF346Q9UL40 294 aaKnown RBP11.08□□□□□ -0.64
CHD3-206ENST00000452447 HIF3AQ9Y2N7 669 aa11.08□□□□□ -0.64
CHD3-206ENST00000452447 WNK2Q9Y3S1 2297 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 LRP5LA4QPB2 252 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 CXCR6O00574 342 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 NDUFAB1O14561 156 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 PIP5K1CO60331 668 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 SLC2A10O95528 541 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 LCKP06239 509 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 HNF1AP20823 631 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 APLNRP35414 380 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 RAD52P43351 418 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 SLC7A2P52569 658 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 HSF2Q03933 536 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 TOP3AQ13472 1001 aaPredicted RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 TRAM2Q15035 370 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 TAF11Q15544 211 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 NKPD1Q17RQ9 610 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 FKBP9P1Q75LS8 142 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 ARIH2OSQ8N7S6 290 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 GEMIN6Q8WXD5 167 aaKnown RBP11.07□□□□□ -0.64
CHD3-206ENST00000452447 NSMAFQ92636 917 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 RBP7Q96R05 134 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 OR51B6Q9H340 312 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 SIAEQ9HAT2 523 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 CCNB1IP1Q9NPC3 277 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 RHCGQ9UBD6 479 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 GPR160Q9UJ42 338 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 GMNCA6NCL1 334 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 RNF212BA8MTL3 300 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 LYNX1G3V0Z9 82 aa11.07□□□□□ -0.64
CHD3-206ENST00000452447 LILRA1O75019 489 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms