RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 STK38LQ9Y2H1 464 aa2.56□□□□□ -2
VPS8-211ENST00000452140 N6AMT1Q9Y5N5 214 aa2.56□□□□□ -2
VPS8-211ENST00000452140 F11RQ9Y624 299 aaKnown RBP2.56□□□□□ -2
VPS8-211ENST00000452140 PLEKHG2Q9H7P9 1386 aa2.56□□□□□ -2
VPS8-211ENST00000452140 CEP162Q5TB80 1403 aa2.56□□□□□ -2
VPS8-211ENST00000452140 MAPKBP1O60336 1514 aa2.56□□□□□ -2
VPS8-211ENST00000452140 PRDM2Q13029 1718 aa2.56□□□□□ -2
VPS8-211ENST00000452140 CDC42BPBQ9Y5S2 1711 aa2.56□□□□□ -2
VPS8-211ENST00000452140 RLFQ13129 1914 aa2.56□□□□□ -2
VPS8-211ENST00000452140 IGHV3-64DA0A0J9YX35 117 aa2.55□□□□□ -2
VPS8-211ENST00000452140 A0A0U1RQS6 177 aa2.55□□□□□ -2
VPS8-211ENST00000452140 A0A1B0GVI7 797 aa2.55□□□□□ -2
VPS8-211ENST00000452140 HEATR9A2RTY3 570 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SUPT3HB4E1H0 165 aa2.55□□□□□ -2
VPS8-211ENST00000452140 TMX2-CTNND1H3BSU7 103 aa2.55□□□□□ -2
VPS8-211ENST00000452140 LAD1O00515 517 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SLC31A2O15432 143 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SPOPO43791 374 aa2.55□□□□□ -2
VPS8-211ENST00000452140 CD5LO43866 347 aa2.55□□□□□ -2
VPS8-211ENST00000452140 WBP4O75554 376 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 UPK3AO75631 287 aa2.55□□□□□ -2
VPS8-211ENST00000452140 C2P06681 752 aa2.55□□□□□ -2
VPS8-211ENST00000452140 PNMA6AP0CW24 399 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 ZNF30P17039 623 aa2.55□□□□□ -2
VPS8-211ENST00000452140 TUBG1P23258 451 aa2.55□□□□□ -2
VPS8-211ENST00000452140 CHMLP26374 656 aa2.55□□□□□ -2
VPS8-211ENST00000452140 NUP62P37198 522 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 CRYBB2P43320 205 aa2.55□□□□□ -2
VPS8-211ENST00000452140 CDKN1BP46527 198 aa2.55□□□□□ -2
VPS8-211ENST00000452140 FBXW4P57775 412 aa2.55□□□□□ -2
VPS8-211ENST00000452140 TMEM94Q12767 1356 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SMARCB1Q12824 385 aa2.55□□□□□ -2
VPS8-211ENST00000452140 AQP6Q13520 282 aa2.55□□□□□ -2
VPS8-211ENST00000452140 RSPO1Q2MKA7 263 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 ALKBH6Q3KRA9 238 aa2.55□□□□□ -2
VPS8-211ENST00000452140 FBXO48Q5FWF7 155 aa2.55□□□□□ -2
VPS8-211ENST00000452140 LRRC66Q68CR7 880 aa2.55□□□□□ -2
VPS8-211ENST00000452140 Q6P435 159 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 AKNAQ7Z591 1439 aa2.55□□□□□ -2
VPS8-211ENST00000452140 HSD17B11Q8NBQ5 300 aa2.55□□□□□ -2
VPS8-211ENST00000452140 PLPPR1Q8TBJ4 325 aa2.55□□□□□ -2
VPS8-211ENST00000452140 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SLC2A14Q8TDB8 520 aa2.55□□□□□ -2
VPS8-211ENST00000452140 MCOLN3Q8TDD5 553 aa2.55□□□□□ -2
VPS8-211ENST00000452140 GEMIN6Q8WXD5 167 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 PHF3Q92576 2039 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 ANP32BQ92688 251 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 SDHCQ99643 169 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 GABARAPL3Q9BY60 117 aa2.55□□□□□ -2
VPS8-211ENST00000452140 SYNDIG1Q9H7V2 258 aa2.55□□□□□ -2
VPS8-211ENST00000452140 ANKRA2Q9H9E1 313 aa2.55□□□□□ -2
VPS8-211ENST00000452140 DMAP1Q9NPF5 467 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 TUBG2Q9NRH3 451 aa2.55□□□□□ -2
VPS8-211ENST00000452140 INPP5EQ9NRR6 644 aa2.55□□□□□ -2
VPS8-211ENST00000452140 EXD2Q9NVH0 621 aa2.55□□□□□ -2
VPS8-211ENST00000452140 ZNF226Q9NYT6 803 aa2.55□□□□□ -2
VPS8-211ENST00000452140 CSDC2Q9Y534 153 aaKnown RBP2.55□□□□□ -2
VPS8-211ENST00000452140 V9GYY5 206 aaPredicted RBP2.55□□□□□ -2
VPS8-211ENST00000452140 SMARCA2P51531 1590 aa2.54□□□□□ -2
VPS8-211ENST00000452140 A0A1B0GTQ1 180 aa2.54□□□□□ -2
VPS8-211ENST00000452140 NKX2-6A6NCS4 301 aa2.54□□□□□ -2
VPS8-211ENST00000452140 ZNF726A6NNF4 738 aa2.54□□□□□ -2
VPS8-211ENST00000452140 SPECC1L-ADORA2AF8WAN1 911 aa2.54□□□□□ -2
VPS8-211ENST00000452140 TEX46H3BTG2 121 aa2.54□□□□□ -2
VPS8-211ENST00000452140 PEX7O00628 323 aa2.54□□□□□ -2
VPS8-211ENST00000452140 LSM1O15116 133 aaKnown RBP2.54□□□□□ -2
VPS8-211ENST00000452140 FGGP02679 453 aa2.54□□□□□ -2
VPS8-211ENST00000452140 HOXC4P09017 264 aaPredicted RBP2.54□□□□□ -2
VPS8-211ENST00000452140 IGHV3-43DP0DP04 118 aa2.54□□□□□ -2
VPS8-211ENST00000452140 MCF2P10911 925 aa2.54□□□□□ -2
VPS8-211ENST00000452140 CD9P21926 228 aa2.54□□□□□ -2
VPS8-211ENST00000452140 IFNA8P32881 189 aa2.54□□□□□ -2
VPS8-211ENST00000452140 BMI1P35226 326 aa2.54□□□□□ -2
VPS8-211ENST00000452140 CXCL5P42830 114 aa2.54□□□□□ -2
VPS8-211ENST00000452140 SLC11A1P49279 550 aa2.54□□□□□ -2
VPS8-211ENST00000452140 RPS21P63220 83 aaKnown RBP2.54□□□□□ -2
VPS8-211ENST00000452140 IL18Q14116 193 aa2.54□□□□□ -2
VPS8-211ENST00000452140 SSX2Q16385 188 aa2.54□□□□□ -2
VPS8-211ENST00000452140 TMEM183BQ1AE95 376 aa2.54□□□□□ -2
VPS8-211ENST00000452140 PIGGQ5H8A4 983 aa2.54□□□□□ -2
VPS8-211ENST00000452140 PIP5KL1Q5T9C9 394 aa2.54□□□□□ -2
VPS8-211ENST00000452140 AGBL2Q5U5Z8 902 aa2.54□□□□□ -2
VPS8-211ENST00000452140 ZNF836Q6ZNA1 936 aa2.54□□□□□ -2
VPS8-211ENST00000452140 C6orf120Q7Z4R8 191 aa2.54□□□□□ -2
VPS8-211ENST00000452140 CAMK2N1Q7Z7J9 78 aa2.54□□□□□ -2
VPS8-211ENST00000452140 BIVMQ86UB2 503 aa2.54□□□□□ -2
VPS8-211ENST00000452140 TMEM183AQ8IXX5 376 aa2.54□□□□□ -2
VPS8-211ENST00000452140 MS4A15Q8N5U1 240 aa2.54□□□□□ -2
VPS8-211ENST00000452140 Q8N9L7 120 aa2.54□□□□□ -2
VPS8-211ENST00000452140 FAM81AQ8TBF8 368 aa2.54□□□□□ -2
VPS8-211ENST00000452140 TMEM54Q969K7 222 aa2.54□□□□□ -2
VPS8-211ENST00000452140 TMIGD2Q96BF3 282 aa2.54□□□□□ -2
VPS8-211ENST00000452140 AURKBQ96GD4 344 aaPredicted RBP2.54□□□□□ -2
VPS8-211ENST00000452140 HAUS4Q9H6D7 363 aa2.54□□□□□ -2
VPS8-211ENST00000452140 NEK6Q9HC98 313 aa2.54□□□□□ -2
VPS8-211ENST00000452140 CTPS2Q9NRF8 586 aa2.54□□□□□ -2
VPS8-211ENST00000452140 AGPAT3Q9NRZ7 376 aa2.54□□□□□ -2
VPS8-211ENST00000452140 SLC2A8Q9NY64 477 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms