RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GYPBP06028 91 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 PRR23D2P0DMB1 279 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 IGHV1-2P23083 117 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 PYCR1P32322 319 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 EFNB1P98172 346 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 TSC22D1Q15714 1073 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 CEACAM16Q2WEN9 425 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 THEM4Q5T1C6 240 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 CXXC5Q7LFL8 322 aaKnown RBP15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 OR51L1Q8NGJ5 315 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 LILRB4Q8NHJ6 448 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 TMEM163Q8TC26 289 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 ZNRF4Q8WWF5 429 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 HTRA1Q92743 480 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 TFAP2CQ92754 450 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 NMNAT2Q9BZQ4 307 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 RASSF1Q9NS23 344 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 JKAMPQ9P055 326 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 B9D1Q9UPM9 204 aa15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 UBR5O95071 2799 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC4-203ENST00000447216 A8MXE2 369 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 H0YAE9 185 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 AHCYL1O43865 530 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 GPANK1O95872 356 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 ITGA5P08648 1049 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 PAICSP22234 425 aaKnown RBP15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF133P52736 654 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 SRSF1Q07955 248 aaKnown RBP eCLIP15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 SLC25A35Q3KQZ1 300 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF691Q5VV52 312 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 Q6ZT83 130 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 BEND4Q6ZU67 534 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 CXorf67Q86X51 503 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 ENTHD1Q8IYW4 607 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR6V1Q8N148 313 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 GABRG1Q8N1C3 465 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 CA5BP1Q8WTZ4 195 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 PTP4A1Q93096 173 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 MUS81Q96NY9 551 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR51V1Q9H2C8 321 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 DNAJC27Q9NZQ0 273 aa15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 COA3Q9Y2R0 106 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-203ENST00000447216 IGLV1-36A0A0B4J1U3 117 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 A0A1W2PPL8 197 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 RPL36A-HNRNPH2H7BZ11 118 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 KHDRBS3O75525 346 aaKnown RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 LYZL6O75951 148 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 RNF224P0DH78 156 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 NR2C1P13056 603 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 SPI1P17947 270 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 MPGP29372 298 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 CDAP32320 146 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 HSPA13P48723 471 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 CENPAP49450 140 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 ASCL1P50553 236 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 SLC25A1P53007 311 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 ARF1P84077 181 aaKnown RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 IL5RAQ01344 420 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 C10orf128Q5T292 105 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 OTPQ5XKR4 325 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 ABHD12BQ7Z5M8 362 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 DEPDC4Q8N2C3 294 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF808Q8N4W9 903 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR8J1Q8NGP2 316 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 FNDC8Q8TC99 324 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF184Q99676 751 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 APOL4Q9BPW4 351 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 UGT2A1Q9Y4X1 527 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 FKBP7Q9Y680 259 aa15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 USP9XQ93008 2570 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC4-203ENST00000447216 AGFG2O95081 481 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 CNOT4O95628 575 aaKnown RBP15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 COX5AP20674 150 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 CRABP1P29762 137 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF84P51523 738 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 FAM27E3Q08E93 113 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 KLHL12Q53G59 568 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 DNM1P34Q6PK57 102 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 XKRXQ6PP77 449 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 LYPD4Q6UWN0 246 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 USP51Q70EK9 711 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZBTB46Q86UZ6 589 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZNF433Q8N7K0 673 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 PROKR2Q8NFJ6 384 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 OR2T4Q8NH00 348 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 GALNT8Q9NY28 637 aa15.81■□□□□ 0.12
TRAPPC4-203ENST00000447216 MPZL1O95297 269 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 SCG5P05408 212 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 B4GALT1P15291 398 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 GABRB1P18505 474 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 SLC2A5P22732 501 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 CD79BP40259 229 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 SNRPGP62308 76 aaKnown RBP15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 IL18R1Q13478 541 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 APOFQ13790 326 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 MAD2L1BPQ15013 274 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 AADACL4Q5VUY2 407 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 B3GLCTQ6Y288 498 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 STAC2Q6ZMT1 411 aa15.8■□□□□ 0.12
TRAPPC4-203ENST00000447216 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms