RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SFXN3Q9BWM7 321 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 UPB1Q9UBR1 384 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 OSGIN2Q9Y236 505 aa18.3■□□□□ 0.52
CHD3-204ENST00000439235 EFCAB10A6NFE3 127 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 HSPB2A8KAH6 182 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 DHHO43323 396 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 XPNPEP2O43895 674 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 SMNDC1O75940 238 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHD3-204ENST00000439235 CRHBPP24387 322 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 CTSSP25774 331 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 GSTT1P30711 240 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 PMPCAQ10713 525 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 STK11Q15831 433 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 HSPB2Q16082 182 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 PHYHD1Q5SRE7 291 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 LRFN4Q6PJG9 635 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 TFAP2EQ6VUC0 442 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.29■□□□□ 0.52
CHD3-204ENST00000439235 UBE2J2Q8N2K1 259 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 GALNT11Q8NCW6 608 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 OR51L1Q8NGJ5 315 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 NSMAFQ92636 917 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 KISS1RQ969F8 398 aaPredicted RBP18.29■□□□□ 0.52
CHD3-204ENST00000439235 RNFT2Q96EX2 444 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 BBC3Q96PG8 261 aaPredicted RBP18.29■□□□□ 0.52
CHD3-204ENST00000439235 AMBNQ9NP70 447 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 SLC7A10Q9NS82 523 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 HAO2Q9NYQ3 351 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 CNOT2Q9NZN8 540 aaKnown RBP18.29■□□□□ 0.52
CHD3-204ENST00000439235 PROCRQ9UNN8 238 aa18.29■□□□□ 0.52
CHD3-204ENST00000439235 COA3Q9Y2R0 106 aaPredicted RBP18.29■□□□□ 0.52
CHD3-204ENST00000439235 IGKV1D-43A0A0B4J1Z2 117 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 FAM171A2A8MVW0 826 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 B8ZZF3 427 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 ZNF587BE7ETH6 402 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 TNFSF13O75888 250 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 STSP08842 583 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 PIPP12273 146 aaPredicted RBP18.28■□□□□ 0.52
CHD3-204ENST00000439235 GABARAPL2P60520 117 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 FOXF2Q12947 444 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 GGTLC2Q14390 218 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 KCTD21Q4G0X4 260 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 KLHL22Q53GT1 634 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 LINC01590Q5TEZ4 76 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 GLB1L2Q8IW92 636 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 ZNF540Q8NDQ6 660 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 IPCEF1Q8WWN9 437 aaPredicted RBP18.28■□□□□ 0.52
CHD3-204ENST00000439235 ZMYND19Q96E35 227 aaPredicted RBP18.28■□□□□ 0.52
CHD3-204ENST00000439235 DMRTA2Q96SC8 542 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 CRLF2Q9HC73 371 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 CCNB1IP1Q9NPC3 277 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 MALT1Q9UDY8 824 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 PSORS1C1Q9UIG5 152 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 MEMO1Q9Y316 297 aa18.28■□□□□ 0.52
CHD3-204ENST00000439235 GCN1Q92616 2671 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 A0A1W2PPL8 197 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 RPL36A-HNRNPH2H7BZ11 118 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 CNOT4O95628 575 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 IGHV3-9P01782 118 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 HLA-DQA2P01906 255 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 LAP3P28838 519 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 OPRM1P35372 400 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 ATP6V1E1P36543 226 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 GUCA1AP43080 201 aaPredicted RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 SLC15A1P46059 708 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 ROR2Q01974 943 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 TLE1Q04724 770 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 RAB40BQ12829 278 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 MRPL49Q13405 166 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 ETFDHQ16134 617 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 FBXW9Q5XUX1 488 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 VWA1Q6PCB0 445 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 ATCAYQ86WG3 371 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 NAXEQ8NCW5 288 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 ZNRF4Q8WWF5 429 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 CNN2Q99439 309 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 RBM24Q9BX46 236 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 GPR35Q9HC97 309 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 MRPS18AQ9NVS2 196 aaKnown RBP18.27■□□□□ 0.52
CHD3-204ENST00000439235 PRSS50Q9UI38 385 aa18.27■□□□□ 0.52
CHD3-204ENST00000439235 EIF4E1BA6NMX2 242 aaKnown RBP18.26■□□□□ 0.51
CHD3-204ENST00000439235 IL18BPO95998 194 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 CD8BP10966 210 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 EEF1B2P24534 225 aaKnown RBP18.26■□□□□ 0.51
CHD3-204ENST00000439235 EDNRAP25101 427 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 DBPQ10586 325 aaPredicted RBP18.26■□□□□ 0.51
CHD3-204ENST00000439235 CEACAM16Q2WEN9 425 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 AHSA2Q719I0 299 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 BTLAQ7Z6A9 289 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 OR51G2Q8NGK0 314 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 RND1Q92730 232 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 GGHQ92820 318 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 MYDGFQ969H8 173 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 LGALS12Q96DT0 336 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 INTS14Q96SY0 518 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 PLSCR4Q9NRQ2 329 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 FKBP14Q9NWM8 211 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 PCDHGB1Q9Y5G3 927 aa18.26■□□□□ 0.51
CHD3-204ENST00000439235 PTGES3LE9PB15 166 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 FADS2O95864 444 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms