RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CMAHPQ9Y471 501 aa13.75□□□□□ -0.21
SGCE-205ENST00000437425 MRPS18BQ9Y676 258 aaKnown RBP13.75□□□□□ -0.21
SGCE-205ENST00000437425 ISPDA4D126 451 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TVP23AA6NH52 213 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF726A6NNF4 738 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF879B4DU55 563 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF254O75437 659 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 CD96P40200 585 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 DNASE1L1P49184 302 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 AGFG1P52594 562 aaKnown RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 CLRN1P58418 232 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 RAC3P60763 192 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ADAM8P78325 824 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 MXD1Q05195 221 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TOMM20Q15388 145 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 PCK2Q16822 640 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 PDSS1Q5T2R2 415 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ESPNLQ6ZVH7 1005 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 CEACAM19Q7Z692 300 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 CCDC190Q86UF4 302 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF227Q86WZ6 799 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 GLB1L2Q8IW92 636 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF679Q8IYX0 411 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 MINDY2Q8NBR6 621 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 NOXO1Q8NFA2 376 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 THEM6Q8WUY1 208 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 OR8B4Q96RC9 309 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 KCNS3Q9BQ31 491 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 SLC30A2Q9BRI3 323 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 RNF32Q9H0A6 362 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 IKZF2Q9UKS7 526 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 UGT2A1Q9Y4X1 527 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 LRRC3CA6NJW4 275 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TMEM212A6NML5 194 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 MASP2O00187 686 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TRAF3IP2O43734 574 aaPredicted RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 ABHD16AO95870 558 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 CALRP27797 417 aaKnown RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 PPP3R1P63098 170 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ALKBH1Q13686 389 aaKnown RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 ZNF181Q2M3W8 571 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 RGS21Q2M5E4 152 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 LIPNQ5VXI9 398 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 LYPD4Q6UWN0 246 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TMPRSS7Q7RTY8 843 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 SLC26A10Q8NG04 563 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 PNPLA2Q96AD5 504 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 INTS12Q96CB8 462 aaKnown RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 UBL7Q96S82 380 aaPredicted RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 COMMD4Q9H0A8 199 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 TIGARQ9NQ88 270 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 FAM86C1Q9NVL1 165 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 MED29Q9NX70 200 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
SGCE-205ENST00000437425 PLEKHB1Q9UF11 243 aaPredicted RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 COA3Q9Y2R0 106 aaPredicted RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 KLF13Q9Y2Y9 288 aaPredicted RBP13.74□□□□□ -0.21
SGCE-205ENST00000437425 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 PROB1E7EW31 1015 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 G3V3Y1 287 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 J3QRK9 145 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 RGS5O15539 181 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 UPK3AO75631 287 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 NEURL1O76050 574 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 PGA4P0DJD7 388 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 PGA3P0DJD8 388 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 TCEA1P23193 301 aaKnown RBP13.73□□□□□ -0.21
SGCE-205ENST00000437425 SHC1P29353 583 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 CCR9P51686 369 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 B3GALT5-AS1P59052 145 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 DBPQ10586 325 aaPredicted RBP13.73□□□□□ -0.21
SGCE-205ENST00000437425 ZMAT1Q5H9K5 638 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 AGAP7PQ5VUJ5 663 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 UNQ9370/PRO34162Q6UXP9 181 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 GPAT4Q86UL3 456 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
SGCE-205ENST00000437425 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 NSMAFQ92636 917 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 TXNDC15Q96J42 360 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 SFXN2Q96NB2 322 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 AGAP4Q96P64 663 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 CCDC32Q9BV29 185 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 MRPL22Q9NWU5 206 aaKnown RBP13.73□□□□□ -0.21
SGCE-205ENST00000437425 GRIP1Q9Y3R0 1128 aa13.73□□□□□ -0.21
SGCE-205ENST00000437425 SPEGQ15772 3267 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 KNTC1P50748 2209 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 NPIPA2E9PIF3 369 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 SPARCP09486 303 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 UCHL1P09936 223 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 OR8G3PP0DMU2 310 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 PTBP1P26599 531 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■■□□ 14.7
SGCE-205ENST00000437425 GDF1P27539 372 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 TNFSF8P32971 234 aa13.72□□□□□ -0.21
SGCE-205ENST00000437425 RIDAP52758 137 aaKnown RBP13.72□□□□□ -0.21
SGCE-205ENST00000437425 FOXK1P85037 733 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms