RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RPS3AP61247 264 aaKnown RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 SLC35D3Q5M8T2 416 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 PDSS1Q5T2R2 415 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 LCN1P1Q5VSP4 162 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 UBE2UQ5VVX9 321 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 FAM205BPQ63HN1 556 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 ZNF324BQ6AW86 544 aaPredicted RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 RPUSD3Q6P087 351 aaKnown RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 LRFN4Q6PJG9 635 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 SLC25A47Q6Q0C1 308 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 LINGO2Q7L985 606 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 ERI1Q8IV48 349 aaKnown RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 SLC35F2Q8IXU6 374 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 SVOPQ8N4V2 548 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 NANOGP1Q8N7R0 232 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 OR10H4Q8NGA5 316 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 OR2T4Q8NH00 348 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 OR6X1Q8NH79 312 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 PNPLA2Q96AD5 504 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 ZNF837Q96EG3 531 aaPredicted RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 SLC25A44Q96H78 314 aaPredicted RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 AMELYQ99218 206 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 CNN2Q99439 309 aaKnown RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 ISG20L2Q9H9L3 353 aaKnown RBP7.87□□□□□ -1.15
SMC6-204ENST00000428868 ERVK13-1Q9NX77 482 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 HAO2Q9NYQ3 351 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 RTTNQ86VV8 2226 aa7.87□□□□□ -1.15
SMC6-204ENST00000428868 TLN1Q9Y490 2541 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 A0A1W2PQL4 384 aaPredicted RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 SNTNA6NMZ2 147 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 H3BSA7 217 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 PSMD9O00233 223 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 MRPS14O60783 128 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 UPK3AO75631 287 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 SEC14L2O76054 403 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 VAMP5O95183 116 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 SYNGR4O95473 234 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 IGHG1P01857 330 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 NR4A1P22736 598 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 DCKP27707 260 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CDAP32320 146 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 LIPAP38571 399 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CSNK1A1P48729 337 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 TDGF1P3P51864 188 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 FOXG1P55316 489 aaPredicted RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 TMED1Q13445 227 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 HIST3H3Q16695 136 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 SYT6Q5T7P8 510 aaPredicted RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 NUFIP2Q7Z417 695 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 ADGRE4PQ86SQ3 457 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CDC20BQ86Y33 519 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 TUSC5Q8IXB3 177 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 RPRMLQ8N4K4 120 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CISD2Q8N5K1 135 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 ZFP41Q8N8Y5 198 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 OR13F1Q8NGS4 319 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 OR6N2Q8NGY6 317 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 SPRYD4Q8WW59 207 aaPredicted RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 MCHR2Q969V1 340 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 GPR137Q96N19 417 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 OPALINQ96PE5 141 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 SF3B5Q9BWJ5 86 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 JAM3Q9BX67 310 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 RACGAP1Q9H0H5 632 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 MARCH7Q9H992 704 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CALHM2Q9HA72 323 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 EMC7Q9NPA0 242 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 TIGARQ9NQ88 270 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 KCNG2Q9UJ96 466 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 FOXD3Q9UJU5 478 aaPredicted RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 EXOSC1Q9Y3B2 195 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 UGT2A1Q9Y4X1 527 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 CEPT1Q9Y6K0 416 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
SMC6-204ENST00000428868 PRR14LQ5THK1 2151 aa7.86□□□□□ -1.15
SMC6-204ENST00000428868 FLNBO75369 2602 aaKnown RBP7.85□□□□□ -1.15
SMC6-204ENST00000428868 IGKV3D-15A0A087WSY6 115 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 A0A1W2PPL8 197 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 TMEM129A0AVI4 362 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 ZNF726A6NNF4 738 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 E9PI62 339 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 M0R3G1 203 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 MYL12BO14950 172 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 KHDRBS3O75525 346 aaKnown RBP7.85□□□□□ -1.15
SMC6-204ENST00000428868 IGHV3-9P01782 118 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 HLA-DQA2P01906 255 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 QDPRP09417 244 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 ATP6V1E1P36543 226 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 MED22Q15528 200 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 INAQ16352 499 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 SSX1Q16384 188 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 TSTQ16762 297 aaKnown RBP7.85□□□□□ -1.15
SMC6-204ENST00000428868 TIGD6Q17RP2 521 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 TP53I3Q53FA7 332 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 RNLSQ5VYX0 342 aa7.85□□□□□ -1.15
SMC6-204ENST00000428868 PCSK4Q6UW60 755 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms