RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SLC35F4A4IF30 521 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 RPP14O95059 124 aaKnown RBP23.68■■□□□ 1.38
LDB1-202ENST00000425280 SERPINA3P01011 423 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 RFPL3SP0C7P2 107 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 RBMS1P29558 406 aaKnown RBP23.68■■□□□ 1.38
LDB1-202ENST00000425280 TGIF1Q15583 401 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 LRRC69Q6ZNQ3 347 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 ADAMTS14Q8WXS8 1223 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 HSD17B8Q92506 261 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 MRPL13Q9BYD1 178 aaKnown RBP23.68■■□□□ 1.38
LDB1-202ENST00000425280 CMAHPQ9Y471 501 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 CENPBD1B2RD01 187 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 MPZL1O95297 269 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 CNR1P21554 472 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 RAC1P63000 192 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 ADAM8P78325 824 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 SPANXN2Q5MJ10 180 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 YRDCQ86U90 279 aaKnown RBP23.68■■□□□ 1.38
LDB1-202ENST00000425280 AP3S1Q92572 193 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 NCKAP5O14513 1909 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 PINLYPA6NC86 204 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 GPRIN2O60269 458 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 SPARCP09486 303 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 H3F3AP84243 136 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 ZMAT1Q5H9K5 638 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 TEX19Q8NA77 164 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 SLC39A7Q92504 469 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 WDFY2Q96P53 400 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 SLC30A2Q9BRI3 323 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 SLCO1C1Q9NYB5 712 aa23.67■■□□□ 1.38
LDB1-202ENST00000425280 LOC102725191A0A1B0GVB3 256 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 NEURL1O76050 574 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 NR2C2APQ86WQ0 139 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 SLC26A10Q8NG04 563 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 MIXL1Q9H2W2 232 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 ABCB9Q9NP78 766 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 FREM3P0C091 2139 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 KHDRBS3O75525 346 aaKnown RBP23.66■■□□□ 1.38
LDB1-202ENST00000425280 ZNF12P17014 697 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 MRPL28Q13084 256 aaKnown RBP23.66■■□□□ 1.38
LDB1-202ENST00000425280 SLC18B1Q6NT16 456 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 OR14L1PQ8NHC6 308 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 HAVCR2Q8TDQ0 301 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 ASB17Q8WXJ9 295 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 FER1L6-AS2Q96M78 137 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 SIGLEC12Q96PQ1 595 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 ATF6BQ99941 703 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 ABI3Q9P2A4 366 aa23.66■■□□□ 1.38
LDB1-202ENST00000425280 CASRP41180 1078 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 FOXO1Q12778 655 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 PAMR1Q6UXH9 720 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 KIAA1143Q96AT1 154 aaPredicted RBP23.65■■□□□ 1.38
LDB1-202ENST00000425280 MAP6Q96JE9 813 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 UTP23Q9BRU9 249 aaKnown RBP23.65■■□□□ 1.38
LDB1-202ENST00000425280 TTYH2Q9BSA4 534 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 ASCL3Q9NQ33 180 aa23.65■■□□□ 1.38
LDB1-202ENST00000425280 A0A0J9YW62 118 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 ZFPL1O95159 310 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 PGA4P0DJD7 388 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 PGA3P0DJD8 388 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 ZNF43P17038 809 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 MYL9P24844 172 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 CD97P48960 835 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 CAMK2DQ13557 499 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 ALKBH1Q13686 389 aaKnown RBP23.64■■□□□ 1.38
LDB1-202ENST00000425280 ATP1A1-AS1Q5TC04 95 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 CLEC1AQ8NC01 280 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 FAM83FQ8NEG4 500 aaPredicted RBP23.64■■□□□ 1.38
LDB1-202ENST00000425280 SLC25A44Q96H78 314 aaPredicted RBP23.64■■□□□ 1.38
LDB1-202ENST00000425280 RBP7Q96R05 134 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 OR8B4Q96RC9 309 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 ZFP64Q9NPA5 681 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 FRRS1LQ9P0K9 344 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 RASD1Q9Y272 281 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 ZNF281Q9Y2X9 895 aa23.64■■□□□ 1.38
LDB1-202ENST00000425280 A0A087WV48 116 aa23.64■■□□□ 1.37
LDB1-202ENST00000425280 RGS21Q2M5E4 152 aa23.64■■□□□ 1.37
LDB1-202ENST00000425280 NOXO1Q8NFA2 376 aa23.64■■□□□ 1.37
LDB1-202ENST00000425280 OR6X1Q8NH79 312 aa23.64■■□□□ 1.37
LDB1-202ENST00000425280 EIF1BO60739 113 aaKnown RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 UPK1BO75841 260 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 GATBO75879 557 aaKnown RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 IGHG1P01857 330 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 CSRP1P21291 193 aaKnown RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 CLRN1P58418 232 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 EIF2B1Q14232 305 aaKnown RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 LRRN1Q6UXK5 716 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 UNQ9370/PRO34162Q6UXP9 181 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 HDDC2Q7Z4H3 204 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 TPRA1Q86W33 373 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 RGP1Q92546 391 aaPredicted RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 NSMAFQ92636 917 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 OR14A2Q96R54 314 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 ELOVL3Q9HB03 270 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 MRPS18CQ9Y3D5 142 aaKnown RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 A0A1W2PPK0 400 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 GJE1A6NN92 205 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 HSPB2A8KAH6 182 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 TNFSF11O14788 317 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 WDPCPO95876 746 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms