RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GKAP1Q5VSY0 366 aaPredicted RBP18.97■□□□□ 0.63
TRAF4-204ENST00000422344 TBPL2Q6SJ96 375 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 DPPA2Q7Z7J5 298 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 ANKS4BQ8N8V4 417 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 OR4K5Q8NGD3 323 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 OR13C2Q8NGS9 318 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 CCT8L2Q96SF2 557 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 SEPHS2Q99611 448 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 SH3GL3Q99963 347 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 REG4Q9BYZ8 158 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 GORASP2Q9H8Y8 452 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 RNF121Q9H920 327 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 ZNF224Q9NZL3 707 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 TMEM5Q9Y2B1 443 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 V9GYQ6 96 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 ALPK2Q86TB3 2170 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 ANK3Q12955 4377 aaKnown RBP18.97■□□□□ 0.63
TRAF4-204ENST00000422344 hCG_2039718K7EN88 272 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 ZNF14P17017 642 aaPredicted RBP18.96■□□□□ 0.63
TRAF4-204ENST00000422344 ITGA2P17301 1181 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 RHCEP18577 417 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 THBS4P35443 961 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 EFNA4P52798 201 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 CTXN1P60606 82 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 RPL27P61353 136 aaKnown RBP18.96■□□□□ 0.63
TRAF4-204ENST00000422344 GALK2Q01415 458 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 EFNB3Q15768 340 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 MST1LQ2TV78 715 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 SLC36A2Q495M3 483 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 NRN1LQ496H8 165 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 FAM205BPQ63HN1 556 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 KRT80Q6KB66 452 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 TMEM53Q6P2H8 277 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 SLC16A14Q7RTX9 510 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 IGFN1Q86VF2 1251 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 DEFB107AQ8IZN7 70 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 NSMCE2Q96MF7 247 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 TNFRSF13CQ96RJ3 184 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 SMURF2Q9HAU4 748 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 KRCC1Q9NPI7 259 aaPredicted RBP18.96■□□□□ 0.63
TRAF4-204ENST00000422344 NDUFAF4Q9P032 175 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 FBXO9Q9UK97 447 aaPredicted RBP18.96■□□□□ 0.63
TRAF4-204ENST00000422344 FKBP7Q9Y680 259 aa18.96■□□□□ 0.63
TRAF4-204ENST00000422344 A6NIZ1 184 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 CRLF1O75462 422 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 PATE4P0C8F1 98 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 RPL4P36578 427 aaKnown RBP18.95■□□□□ 0.62
TRAF4-204ENST00000422344 RAP1BP61224 184 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 RAP1AP62834 184 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 RAB39AQ14964 217 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 FAM86B1Q8N7N1 296 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 SLC7A13Q8TCU3 470 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 HDAC2Q92769 488 aaKnown RBP18.95■□□□□ 0.62
TRAF4-204ENST00000422344 MCUR1Q96AQ8 359 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 PYURFQ96I23 114 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 RBP7Q96R05 134 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 VRK1Q99986 396 aaPredicted RBP18.95■□□□□ 0.62
TRAF4-204ENST00000422344 ALG12Q9BV10 488 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 KCNN2Q9H2S1 579 aa18.95■□□□□ 0.62
TRAF4-204ENST00000422344 ZNF346Q9UL40 294 aaKnown RBP18.95■□□□□ 0.62
TRAF4-204ENST00000422344 A0A1W2PRQ8 180 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 SLC2A10O95528 541 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 IGHMP01871 453 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 NR4A1P22736 598 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 MSX2P35548 267 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-204ENST00000422344 DGCR6Q14129 220 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 SPATS1Q496A3 300 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 C10orf128Q5T292 105 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 PODNL1Q6PEZ8 512 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 DNM1P46Q6ZS02 220 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 TMPRSS11FQ6ZWK6 438 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 TSEN54Q7Z6J9 526 aaKnown RBP18.94■□□□□ 0.62
TRAF4-204ENST00000422344 FNDC8Q8TC99 324 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 NSMAFQ92636 917 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 ZNF75AQ96N20 296 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 KCNK17Q96T54 332 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 PLK3Q9H4B4 646 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 CMAHPQ9Y471 501 aa18.94■□□□□ 0.62
TRAF4-204ENST00000422344 ABCA1O95477 2261 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 ARPC2O15144 300 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 MGRN1O60291 552 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 FAM107AO95990 144 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 SERPINA5P05154 406 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 CSF3P09919 207 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 ZNF133P52736 654 aaPredicted RBP18.93■□□□□ 0.62
TRAF4-204ENST00000422344 SMIM11AP58511 58 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 RPS23P62266 143 aaKnown RBP18.93■□□□□ 0.62
TRAF4-204ENST00000422344 VLDLRP98155 873 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 PLP2Q04941 152 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 FMODQ06828 376 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 KRTAP1-1Q07627 177 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 FXNQ16595 210 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 ZBED5Q49AG3 693 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 LRRC18Q8N456 261 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 ZNF525Q8N782 197 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 LRRC75AQ8NAA5 344 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 CCDC197Q8NCU1 140 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 MAPK1IP1LQ8NDC0 245 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 FGFBP3Q8TAT2 258 aa18.93■□□□□ 0.62
TRAF4-204ENST00000422344 FAM168AQ92567 244 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms