RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SLC7A10Q9NS82 523 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CMTM6Q9NX76 183 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 NPAP1Q9NZP6 1156 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 B3GAT1Q9P2W7 334 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 UPB1Q9UBR1 384 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 BAG5Q9UL15 447 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 RCE1Q9Y256 329 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 B3GALT5Q9Y2C3 310 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 RNF115Q9Y4L5 304 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CADP27708 2225 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 ACANP16112 2415 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 A0A1W2PR80 420 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 DPRXA6NFQ7 191 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 NME4O00746 187 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 CLOCKO15516 846 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 TRAF3IP2O43734 574 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SNX3O60493 162 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 BGLAPP02818 100 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 THY1P04216 161 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ANXA2P07355 339 aaKnown RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 NQO1P15559 274 aaKnown RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF43P17038 809 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MPGP29372 298 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 NUDT2P50583 147 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SLC7A2P52569 658 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 GNGT1P63211 74 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 BSPH1Q075Z2 132 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 LGALS3BPQ08380 585 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 C1DQ13901 141 aaKnown RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 GABRA6Q16445 453 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 LRRC23Q53EV4 343 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 CYBRD1Q53TN4 286 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 OR7E24Q6IFN5 339 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ADAM5Q6NVV9 412 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 C8orf82Q6P1X6 216 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 NIPAL3Q6P499 406 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 HACD2Q6Y1H2 254 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 H1FNTQ75WM6 255 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SSX8Q7RTT4 187 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MICU2Q8IYU8 434 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 C17orf78Q8N4C9 275 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 C10orf53Q8N6V4 93 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SCAIQ8N9R8 606 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 POMGNT2Q8NAT1 580 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ADPRHL1Q8NDY3 354 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 KBTBD8Q8NFY9 601 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 OR52N5Q8NH56 324 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ADAMTS16Q8TE57 1224 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 AKAP1Q92667 903 aaKnown RBP eCLIP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SLC41A3Q96GZ6 507 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MUS81Q96NY9 551 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 OXGR1Q96P68 337 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MOGAT1Q96PD6 335 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 ALKBH3Q96Q83 286 aaPredicted RBP6.05□□□□□ -1.44
HMGN1-205ENST00000419378 CCL19Q99731 98 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 MYLK2Q9H1R3 596 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SLC7A7Q9UM01 511 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 AP3M1Q9Y2T2 418 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SH3GLB1Q9Y371 365 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 SLC25A15Q9Y619 301 aa6.05□□□□□ -1.44
HMGN1-205ENST00000419378 PLCE1Q9P212 2302 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ARID1AO14497 2285 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LOC102725191A0A1B0GVB3 256 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ELOVL7A1L3X0 281 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 TRAPPC13A5PLN9 417 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 GMNCA6NCL1 334 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 OR6C65A6NJZ3 312 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF587BE7ETH6 402 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LRRN3E7EW58 273 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MS4A18H0YCH9 400 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 KPNA4O00629 521 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 HS3ST1O14792 307 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SHOX2O60902 331 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SMPD2O60906 423 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 UPK3AO75631 287 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 KRT33AO76009 404 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 NCR1O76036 304 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF432O94892 652 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 HPRP00739 348 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MT-ATP6P00846 226 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 IFNA14P01570 189 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 HLA-DOBP13765 273 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 CDH2P19022 906 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 KDELR2P33947 212 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF83P51522 516 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF134P52741 427 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 CLDN17P56750 224 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 TAS2R41P59536 307 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 SLC25A3Q00325 362 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 IL1RL1Q01638 556 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 POU3F1Q03052 451 aaPredicted RBP6.04□□□□□ -1.44
HMGN1-205ENST00000419378 TGFBR3Q03167 851 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 LIPEQ05469 1076 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 PUDPQ08623 228 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 PMS2P3Q13401 168 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF74Q16587 644 aa6.04□□□□□ -1.44
HMGN1-205ENST00000419378 MS4A18Q3C1V0 323 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms