RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FUT4P22083 530 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 THBS4P35443 961 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 MSX2P35548 267 aaPredicted RBP9.71□□□□□ -0.86
RFFL-204ENST00000414419 GPR4P46093 362 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 EFNA4P52798 201 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SMIM11AP58511 58 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 RAP1BP61224 184 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 RAP1AP62834 184 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 LSM11P83369 360 aaKnown RBP eCLIP9.71□□□□□ -0.86
RFFL-204ENST00000414419 HGFACQ04756 655 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 PLP2Q04941 152 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SNTB2Q13425 540 aaKnown RBP9.71□□□□□ -0.86
RFFL-204ENST00000414419 DGCR6Q14129 220 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 RAB39AQ14964 217 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ADIPOQQ15848 244 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 HIST3H3Q16695 136 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SWI5Q1ZZU3 235 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SPATS1Q496A3 300 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NRN1LQ496H8 165 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ZBED5Q49AG3 693 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ARMC4Q5T2S8 1044 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 FAM205BPQ63HN1 556 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 KRT80Q6KB66 452 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 TMPRSS11FQ6ZWK6 438 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 IGFN1Q86VF2 1251 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 LRRC18Q8N456 261 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 OR4K5Q8NGD3 323 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 OR52J3Q8NH60 311 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SLC7A13Q8TCU3 470 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NSMAFQ92636 917 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 HTRA1Q92743 480 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NSL1Q96IY1 281 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SH3GL3Q99963 347 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ALG12Q9BV10 488 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 REG4Q9BYZ8 158 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ZNF442Q9H7R0 627 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 SMURF2Q9HAU4 748 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 CCNB1IP1Q9NPC3 277 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ZNF224Q9NZL3 707 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NDUFAF4Q9P032 175 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 GRHPRQ9UBQ7 328 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ZNF346Q9UL40 294 aaKnown RBP9.71□□□□□ -0.86
RFFL-204ENST00000414419 AURKCQ9UQB9 309 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 CMAHPQ9Y471 501 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.86
RFFL-204ENST00000414419 IQCMA0A1B0GVH7 501 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 B2RBV5 119 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 XKRYO14609 159 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 DIRAS1O95057 198 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 SLC2A10O95528 541 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 F12P00748 615 aaPredicted RBP9.7□□□□□ -0.86
RFFL-204ENST00000414419 IGHMP01871 453 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 TP53P04637 393 aaPredicted RBP9.7□□□□□ -0.86
RFFL-204ENST00000414419 SERPINA5P05154 406 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 CSF3P09919 207 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 NR4A1P22736 598 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 RPS23P62266 143 aaKnown RBP9.7□□□□□ -0.86
RFFL-204ENST00000414419 VLDLRP98155 873 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 EFNB3Q15768 340 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 SGCAQ16586 387 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 MST1LQ2TV78 715 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 THEM4Q5T1C6 240 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 C10orf128Q5T292 105 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 PODNL1Q6PEZ8 512 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 FITM2Q8N6M3 262 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 FAM86B1Q8N7N1 296 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 OR13C2Q8NGS9 318 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 FAM168AQ92567 244 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 HDAC2Q92769 488 aaKnown RBP9.7□□□□□ -0.86
RFFL-204ENST00000414419 FAM46AQ96IP4 442 aaKnown RBP9.7□□□□□ -0.86
RFFL-204ENST00000414419 C7orf34Q96L11 122 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 KCNK17Q96T54 332 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 SEPHS2Q99611 448 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 RAB1BQ9H0U4 201 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 LRMDAQ9H2I8 198 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 C1orf198Q9H425 327 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 PLK3Q9H4B4 646 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 SIAEQ9HAT2 523 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 DYNLRB1Q9NP97 96 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 CD300AQ9UGN4 299 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 ABCA1O95477 2261 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 NAV3Q8IVL0 2385 aa9.7□□□□□ -0.86
RFFL-204ENST00000414419 SLC22A23A1A5C7 686 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 SH3PXD2BA1X283 911 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 CDC42EP2O14613 210 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 ARPC2O15144 300 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 GADD45GO95257 159 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 FABP3P05413 133 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 ZNF35P13682 527 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 HIVEP2P31629 2446 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 ZNF133P52736 654 aaPredicted RBP9.69□□□□□ -0.86
RFFL-204ENST00000414419 ERVK-25P63136 954 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 MRPS34P82930 218 aaKnown RBP9.69□□□□□ -0.86
RFFL-204ENST00000414419 PPP2R2BQ00005 443 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 SPIBQ01892 262 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 HSF2Q03933 536 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 FMODQ06828 376 aa9.69□□□□□ -0.86
RFFL-204ENST00000414419 FXNQ16595 210 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms