RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 MCUR1Q96AQ8 359 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 DHRS1Q96LJ7 313 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 KCNK17Q96T54 332 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 IGKV1D-43A0A0B4J1Z2 117 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 SMAD7O15105 426 aaKnown RBP16.32■□□□□ 0.2
TRIM56-202ENST00000412507 FARS2O95363 451 aaKnown RBP16.32■□□□□ 0.2
TRIM56-202ENST00000412507 FABP3P05413 133 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 ATP6V1B2P21281 511 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 RPL4P36578 427 aaKnown RBP16.32■□□□□ 0.2
TRIM56-202ENST00000412507 ERVK-25P63136 954 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 SPIBQ01892 262 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 CHRNB3Q05901 458 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 RAB39AQ14964 217 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 MST1LQ2TV78 715 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 NIPBLQ6KC79 2804 aaeCLIP16.32■□□□□ 0.26e-6■■■□□ 16.7
TRIM56-202ENST00000412507 CLDN22Q8N7P3 220 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 IL17RDQ8NFM7 739 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 NMD3Q96D46 503 aaKnown RBP16.32■□□□□ 0.2
TRIM56-202ENST00000412507 COX4I2Q96KJ9 171 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 FUZQ9BT04 418 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 DENND2DQ9H6A0 471 aaPredicted RBP16.32■□□□□ 0.2
TRIM56-202ENST00000412507 ACTR3BQ9P1U1 418 aa16.32■□□□□ 0.2
TRIM56-202ENST00000412507 SSX4O60224 188 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ENTPD5O75356 428 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 GADD45GO95257 159 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF26P17031 533 aaPredicted RBP16.31■□□□□ 0.2
TRIM56-202ENST00000412507 THBS4P35443 961 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 SERPINF1P36955 418 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 OMPP47874 163 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 LIMS1P48059 325 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 TNK1Q13470 666 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ADIPOQQ15848 244 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ETFDHQ16134 617 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 SLC25A47Q6Q0C1 308 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 SLC16A14Q7RTX9 510 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 BIVMQ86UB2 503 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ARHGAP24Q8N264 748 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 NUP37Q8NFH4 326 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF519Q8TB69 540 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 BCAS4Q8TDM0 211 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 NSMAFQ92636 917 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 RBP7Q96R05 134 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 RNF121Q9H920 327 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 AURKCQ9UQB9 309 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ADAM18Q9Y3Q7 739 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 PMF1-BGLAPU3KQ54 211 aa16.31■□□□□ 0.2
TRIM56-202ENST00000412507 ZFHX3Q15911 3703 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 NSD1Q96L73 2696 aaPredicted RBP16.3■□□□□ 0.2
TRIM56-202ENST00000412507 SH3PXD2BA1X283 911 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 PTP4A3O75365 173 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 PDE5AO76074 875 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 CD14P08571 375 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 OR4A8P0C604 315 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 NR2C1P13056 603 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 CDAP32320 146 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 SMIM11AP58511 58 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 DAG1Q14118 895 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 RAB35Q15286 201 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 FAM205BPQ63HN1 556 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 KRT80Q6KB66 452 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 TMEM53Q6P2H8 277 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF584Q8IVC4 421 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 ZDHHC21Q8IVQ6 265 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 LRRC18Q8N456 261 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 ARIH2OSQ8N7S6 290 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 RSRC1Q96IZ7 334 aaKnown RBP16.3■□□□□ 0.2
TRIM56-202ENST00000412507 SMURF2Q9HAU4 748 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 BARX1Q9HBU1 254 aaPredicted RBP16.3■□□□□ 0.2
TRIM56-202ENST00000412507 IL1RAPQ9NPH3 570 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 FBXL3Q9UKT7 428 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 SIGLEC7Q9Y286 467 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 UGT2A1Q9Y4X1 527 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 CSPG4Q6UVK1 2322 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 NF1P21359 2839 aa16.3■□□□□ 0.2
TRIM56-202ENST00000412507 A6NIZ1 184 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 H7C1C5 153 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 H7C417 338 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SERPINA5P05154 406 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 BMP4P12644 408 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF35P13682 527 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 RRM2P31350 389 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 NUDT6P53370 316 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 RAP1BP61224 184 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SNRPD2P62316 118 aaKnown RBP16.29■□□□□ 0.2
TRIM56-202ENST00000412507 LCN6P62502 163 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 RAP1AP62834 184 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 MRPS34P82930 218 aaKnown RBP16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SNTB2Q13425 540 aaKnown RBP16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SGCAQ16586 387 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SLC36A2Q495M3 483 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 NRN1LQ496H8 165 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 THEM4Q5T1C6 240 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 NABP1Q96AH0 204 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 Q96M85 177 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 GPA33Q99795 319 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF442Q9H7R0 627 aa16.29■□□□□ 0.2
TRIM56-202ENST00000412507 SIAEQ9HAT2 523 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms