RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 MSI2Q96DH6 328 aaKnown RBP9.99□□□□□ -0.81
LINC00963-201ENST00000412141 ELAC2Q9BQ52 826 aaKnown RBP9.99□□□□□ -0.81
LINC00963-201ENST00000412141 BEX2Q9BXY8 128 aa9.99□□□□□ -0.81
LINC00963-201ENST00000412141 CDH20Q9HBT6 801 aa9.99□□□□□ -0.81
LINC00963-201ENST00000412141 MYEF2Q9P2K5 600 aaKnown RBP9.99□□□□□ -0.81
LINC00963-201ENST00000412141 REV1Q9UBZ9 1251 aa9.99□□□□□ -0.81
LINC00963-201ENST00000412141 A4GNTQ9UNA3 340 aa9.99□□□□□ -0.81
LINC00963-201ENST00000412141 A0A1W2PPW3 197 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NDUFS8O00217 210 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 CXCR6O00574 342 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NME4O00746 187 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 SYNGR3O43761 229 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 LMX1BO60663 402 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 CCDC22O60826 627 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 TGFAP01135 160 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 IFNW1P05000 195 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 LCKP06239 509 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 SAGP10523 405 aaPredicted RBP9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NAT2P11245 290 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 MAKP20794 623 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 CCNOP22674 350 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 IFNA8P32881 189 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 GLRXP35754 106 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 GSK3BP49841 420 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 GZMKP49863 264 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NUDT2P50583 147 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 DAP3P51398 398 aaKnown RBP9.98□□□□□ -0.81
LINC00963-201ENST00000412141 ERVS71-1P61550 626 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 SELENOWP63302 87 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 ST3GAL3Q11203 375 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 ALG10Q5BKT4 473 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 CXXC5Q7LFL8 322 aaKnown RBP9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NRMQ8IXM6 262 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 UBASH3BQ8TF42 649 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NEU4Q8WWR8 484 aaPredicted RBP9.98□□□□□ -0.81
LINC00963-201ENST00000412141 HDAC2Q92769 488 aaKnown RBP9.98□□□□□ -0.81
LINC00963-201ENST00000412141 BPIFA2Q96DR5 249 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 PRRC1Q96M27 445 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 SNX18Q96RF0 628 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 SOX7Q9BT81 388 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 FNDC11Q9BVV2 318 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 CCDC134Q9H6E4 229 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 NARFLQ9H6Q4 476 aa9.98□□□□□ -0.81
LINC00963-201ENST00000412141 YLPM1P49750 1951 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 TRAV27A0A087WT01 109 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 IGKV1D-43A0A0B4J1Z2 117 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 M0R233 179 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 FFAR1O14842 300 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 SLC22A2O15244 555 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 CLPTM1O96005 669 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 SERPINA1P01009 418 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 IFNA2P01563 188 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 HPXP02790 462 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 THRBP10828 461 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 APEX1P27695 318 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 CTXN1P60606 82 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 HSF2Q03933 536 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 PLP2Q04941 152 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 CCNIQ14094 377 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 TRAM2Q15035 370 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 TRIP10Q15642 601 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 NKPD1Q17RQ9 610 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 SLC36A2Q495M3 483 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 ARMC4Q5T2S8 1044 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 TBPL2Q6SJ96 375 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 RBM15BQ8NDT2 890 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 FAM162AQ96A26 154 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 HSH2DQ96JZ2 352 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 MRPL13Q9BYD1 178 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 POLR2J2Q9GZM3 115 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 POLR2J3Q9H1A7 115 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 DENND2DQ9H6A0 471 aaPredicted RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 EFCAB1Q9HAE3 211 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 MED4Q9NPJ6 270 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 TAAR3PQ9P1P4 343 aa9.97□□□□□ -0.81
LINC00963-201ENST00000412141 ZNF346Q9UL40 294 aaKnown RBP9.97□□□□□ -0.81
LINC00963-201ENST00000412141 IQCMA0A1B0GVH7 501 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 RNF212BA8MTL3 300 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 EFCAB9A8MZ26 197 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 H7C1C5 153 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 ENTPD5O75356 428 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 ZNF23P17027 643 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 COL8A2P25067 703 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 IL2RGP31785 369 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 GPR4P46093 362 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.82
LINC00963-201ENST00000412141 LCN6P62502 163 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 ERVK-25P63136 954 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 GLO1Q04760 184 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 FXNQ16595 210 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 HIST3H3Q16695 136 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 IFI44LQ53G44 452 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 PABPC1L2AQ5JQF8 200 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 SPATA46Q5T0L3 261 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 FAM166AQ6J272 317 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
LINC00963-201ENST00000412141 PODNL1Q6PEZ8 512 aa9.96□□□□□ -0.82
LINC00963-201ENST00000412141 ZNF730Q6ZMV8 503 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms