RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 DCKP27707 260 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 SIRPAP78324 504 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 ADAM8P78325 824 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 BCL2A1Q16548 175 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 C9orf135Q5VTT2 229 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 PLEKHG7Q6ZR37 379 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 GATAD2BQ8WXI9 593 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 MCHR2Q969V1 340 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 GPR137Q96N19 417 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 COPS3Q9UNS2 423 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 A0A1W2PQL4 384 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-204ENST00000409530 NPIPB13A6NJU9 1138 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 NPIPB4C9JG80 1138 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 AHCYL1O43865 530 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 NR4A1P22736 598 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 CRABP1P29762 137 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 POU4F3Q15319 338 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 RPTNQ6XPR3 784 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 GPR141Q7Z602 305 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 FGD2Q7Z6J4 655 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 CD163Q86VB7 1156 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 ZFP41Q8N8Y5 198 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 ALG8Q9BVK2 526 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 SF3B5Q9BWJ5 86 aaKnown RBP13.88□□□□□ -0.19
SHANK2-204ENST00000409530 RBM24Q9BX46 236 aaKnown RBP13.88□□□□□ -0.19
SHANK2-204ENST00000409530 MRPL13Q9BYD1 178 aaKnown RBP13.88□□□□□ -0.19
SHANK2-204ENST00000409530 ULBP2Q9BZM5 246 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 PRDM14Q9GZV8 571 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 EMC7Q9NPA0 242 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 ASF1BQ9NVP2 202 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 PAQR5Q9NXK6 330 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-204ENST00000409530 KLHDC2Q9Y2U9 406 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 FKBP7Q9Y680 259 aa13.88□□□□□ -0.19
SHANK2-204ENST00000409530 GTF3C1Q12789 2109 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF99A8MXY4 864 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 UPK3AO75631 287 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 KRT33AO76009 404 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 LIMS3P0CW19 117 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 LIMS4P0CW20 117 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 GP2P55259 537 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 GLO1Q04760 184 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 TBCEQ15813 527 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 INAQ16352 499 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 SLC35D3Q5M8T2 416 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 RPUSD3Q6P087 351 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 DNM1P34Q6PK57 102 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 TMEM123Q8N131 208 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ACBD7Q8N6N7 88 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 SNRNP40Q96DI7 357 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ADAD1Q96M93 576 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 INTS14Q96SY0 518 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 TSC22D3Q99576 134 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 PRORYQ9H606 182 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ISG20L2Q9H9L3 353 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 FGF20Q9NP95 211 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ERVK13-1Q9NX77 482 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 EXOGQ9Y2C4 368 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 POLR1DQ9Y2S0 133 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 MED12LQ86YW9 2145 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 SMG1Q96Q15 3661 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 IRGMA1A4Y4 181 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 TRIM64CA6NLI5 447 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 AKAP8O43823 692 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 MRPL33O75394 65 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ABOP16442 354 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 PTGS2P35354 604 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 TP53I3Q53FA7 332 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 CORO6Q6QEF8 472 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 ZBTB46Q86UZ6 589 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 MUL1Q969V5 352 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 MRPL22Q9NWU5 206 aaKnown RBP13.87□□□□□ -0.19
SHANK2-204ENST00000409530 KCNG2Q9UJ96 466 aa13.87□□□□□ -0.19
SHANK2-204ENST00000409530 SPTA1P02549 2419 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 LOC102725191A0A1B0GVB3 256 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 A0A1B0GVC2 190 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 SLC43A1O75387 559 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
SHANK2-204ENST00000409530 CALRP27797 417 aaKnown RBP13.86□□□□□ -0.19
SHANK2-204ENST00000409530 POU4F2Q12837 409 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 TIGD6Q17RP2 521 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 LRFN4Q6PJG9 635 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 UBE2J2Q8N2K1 259 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 GPR137CQ8N3F9 429 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 RPRMLQ8N4K4 120 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 POMGNT2Q8NAT1 580 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 THEM6Q8WUY1 208 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 SPRYD4Q8WW59 207 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-204ENST00000409530 EMC3Q9P0I2 261 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 MOKQ9UQ07 419 aa13.86□□□□□ -0.19
SHANK2-204ENST00000409530 EXOSC1Q9Y3B2 195 aaKnown RBP13.86□□□□□ -0.19
SHANK2-204ENST00000409530 RP1L1Q8IWN7 2480 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms