RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 PRRC2CQ9Y520 2896 aaKnown RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF587BE7ETH6 402 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 GPR37O15354 613 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 CLIC3O95833 236 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF84P51523 738 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ROR2Q01974 943 aaKnown RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 FMODQ06828 376 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 P2RY6Q15077 328 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 AADACL4Q5VUY2 407 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 NXNL2Q5VZ03 156 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF474Q6S9Z5 364 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 THAP5Q7Z6K1 395 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 C8orf59Q8N0T1 100 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 GABRG1Q8N1C3 465 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF808Q8N4W9 903 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 RELL2Q8NC24 303 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 Q96MT0 163 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 RBM24Q9BX46 236 aaKnown RBP10.85□□□□□ -0.67
LINC00339-201ENST00000404210 RACGAP1Q9H0H5 632 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 CRLF2Q9HC73 371 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 ELOVL5Q9NYP7 299 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 GPR52Q9Y2T5 361 aa10.85□□□□□ -0.67
LINC00339-201ENST00000404210 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 DCTN6O00399 190 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 PRODHO43272 600 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 CTLA4P16410 223 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 SPI1P17947 270 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 IGHV1-2P23083 117 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 MYF6P23409 242 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 LAP3P28838 519 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 GUCA1AP43080 201 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 BLVRAP53004 296 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 IL5RAQ01344 420 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 TEKQ02763 1124 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 TGFBR3Q03167 851 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 TMED1Q13445 227 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ETFDHQ16134 617 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 MEPCEQ7L2J0 689 aaKnown RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF627Q7L945 461 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 LUZP2Q86TE4 346 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 FBLIM1Q8WUP2 373 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF837Q96EG3 531 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 TEAD3Q99594 435 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 HCAR1Q9BXC0 346 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 HDHD5Q9BXW7 423 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ANKRD60Q9BZ19 345 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 Q9H521 79 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 MED20Q9H944 212 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 RASSF1Q9NS23 344 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 CLN6Q9NWW5 311 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-201ENST00000404210 LRRC42Q9Y546 428 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
LINC00339-201ENST00000404210 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 SH3D21A4FU49 640 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 WIPF3A6NGB9 483 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 SNTNA6NMZ2 147 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 EEF1E1-BLOC1S5C9J1V9 151 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 M0R129 80 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 EEF1E1O43324 174 aaKnown RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 GLCEO94923 617 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ITGA5P08648 1049 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 GNAO1P09471 354 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 CLUP10909 449 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 PLA2G2AP14555 144 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 HOXB1P14653 301 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 NPR2P20594 1047 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 COX5AP20674 150 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 SLC2A5P22732 501 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ASCL1P50553 236 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 FOXG1P55316 489 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 GLO1Q04760 184 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 CDK5R2Q13319 367 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 MAD2L1BPQ15013 274 aaPredicted RBP10.83□□□□□ -0.68
LINC00339-201ENST00000404210 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 FBXL19-AS1Q494R0 122 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 KLHL12Q53G59 568 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 SFRP5Q5T4F7 317 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
LINC00339-201ENST00000404210 ZNF433Q8N7K0 673 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms