RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 TSEN54Q7Z6J9 526 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 OFCC1Q8IZS5 231 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 FAM86B1Q8N7N1 296 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 CLDN22Q8N7P3 220 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ANKS4BQ8N8V4 417 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 NOXO1Q8NFA2 376 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR4K5Q8NGD3 323 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR51A7Q8NH64 312 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 GEMIN6Q8WXD5 167 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ASB10Q8WXI3 467 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 MCHR2Q969V1 340 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF566Q969W8 418 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 CMTM5Q96DZ9 223 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 SLC25A44Q96H78 314 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ADAD1Q96M93 576 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF75AQ96N20 296 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 SORCS2Q96PQ0 1159 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 SH3GL3Q99963 347 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 KATNB1Q9BVA0 655 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 FNDC11Q9BVV2 318 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 POLR2J2Q9GZM3 115 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 POLR2J3Q9H1A7 115 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 RASSF4Q9H2L5 321 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 BARX1Q9HBU1 254 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 INIPQ9NRY2 104 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ARL8BQ9NVJ2 186 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ABCD2Q9UBJ2 740 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 AP3M1Q9Y2T2 418 aa4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 ANK3Q12955 4377 aaKnown RBP4.99□□□□□ -1.61
HMGB1P20-201ENST00000402555 MALRD1Q5VYJ5 2156 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 STAB1Q9NY15 2570 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CHD3Q12873 2000 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 A0A087WUU8 490 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 TMEM129A0AVI4 362 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SH3PXD2BA1X283 911 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 EFCAB9A8MZ26 197 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 INAFM1C9JVW0 142 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 H7C1C5 153 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 H7C417 338 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CDC42EP2O14613 210 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 GSC2O15499 205 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 GPRIN2O60269 458 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PRSS23O95084 383 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 RAB36O95755 333 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 TSPAN19P0C672 248 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SAGP10523 405 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CCL2P13500 99 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ACADSP16219 412 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF14P17017 642 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 NPR2P20594 1047 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CDAP32320 146 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 IFNA8P32881 189 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 GPR4P46093 362 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 DAP3P51398 398 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CTXN1P60606 82 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SNRPD2P62316 118 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 LCN6P62502 163 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 RAB1AP62820 205 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ERVK-25P63136 954 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PRKCDQ05655 676 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CHRNB3Q05901 458 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CD47Q08722 323 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 FHL1Q13642 323 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 DAG1Q14118 895 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 TRAM2Q15035 370 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ETFDHQ16134 617 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CARTPTQ16568 116 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 C3orf36Q3SXR2 165 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ALG10Q5BKT4 473 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ARMC4Q5T2S8 1044 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 C1QTNF12Q5T7M4 302 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 GLYATQ6IB77 296 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PODNL1Q6PEZ8 512 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF730Q6ZMV8 503 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PIWIL3Q7Z3Z3 882 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PIGWQ7Z7B1 504 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF584Q8IVC4 421 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CCDC36Q8IYA8 594 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 CDK20Q8IZL9 346 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZCCHC24Q8N2G6 241 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SVOPLQ8N434 492 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 LRRC18Q8N456 261 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SLC22A24Q8N4F4 322 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PAQR4Q8N4S7 273 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 FAM169BQ8N8A8 192 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 LRRC75AQ8NAA5 344 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 NUP37Q8NFH4 326 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR4F15Q8NGB8 312 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR13C2Q8NGS9 318 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 LIPHQ8WWY8 451 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 NSMAFQ92636 917 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 HDAC2Q92769 488 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 BPIFA2Q96DR5 249 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 TSPAN32Q96QS1 320 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 TNFRSF13CQ96RJ3 184 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 VRK1Q99986 396 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 RHNO1Q9BSD3 238 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms