RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ZNF701Q9NV72 531 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 AURKCQ9UQB9 309 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MED13LQ71F56 2210 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FLNAP21333 2647 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 OR10H3O60404 316 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CD14P08571 375 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MAGEA2P43356 314 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF133P52736 654 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ATP5J2P56134 94 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 HGFACQ04756 655 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 C10orf128Q5T292 105 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 AGAP6Q5VW22 663 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LRRC18Q8N456 261 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MOV10Q9HCE1 1003 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GRHPRQ9UBQ7 328 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 UGT2A1Q9Y4X1 527 aa12.22□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IGHV2OR16-5A0A0B4J2B6 119 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 UNC119BA6NIH7 251 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NDUFB2O95178 105 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CD99P14209 185 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PAX1P15863 534 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF14P17017 642 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF84P51523 738 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RAB39AQ14964 217 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MESTQ5EB52 335 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SHEQ5VZ18 495 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 C11orf71Q6IPW1 123 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF544Q6NX49 715 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PGM2L1Q6PCE3 622 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 VHLLQ6RSH7 139 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FAM122BQ7Z309 247 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 YTHDF3Q7Z739 585 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF584Q8IVC4 421 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FBXL14Q8N1E6 418 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NANOS1Q8WY41 292 aaKnown RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RASD2Q96D21 266 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RBP7Q96R05 134 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SMURF2Q9HAU4 748 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 KRCC1Q9NPI7 259 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CA10Q9NS85 328 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CBLN4Q9NTU7 201 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GDF2Q9UK05 429 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TMCC3Q9ULS5 477 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TEX13CA0A0J9YWL9 993 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 A6NIZ1 184 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IMPA2O14732 288 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 UBL3O95164 117 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FARS2O95363 451 aaKnown RBP12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RAB36O95755 333 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 HMGA2P52926 109 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RAP1BP61224 184 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RAP1AP62834 184 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CHRNB3Q05901 458 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 BNIP1Q12981 228 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DNAL1Q4LDG9 190 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FAM98BQ52LJ0 330 aaKnown RBP12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 THEM4Q5T1C6 240 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC25A47Q6Q0C1 308 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC16A14Q7RTX9 510 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR9Q2Q8NGE9 314 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NABP1Q96AH0 204 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FBXO17Q96EF6 278 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 Q96MF0 132 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF570Q96NI8 536 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ALG12Q9BV10 488 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CACNG6Q9BXT2 260 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NRIP3Q9NQ35 241 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 VNN3Q9NY84 501 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 U3KQV3 271 aa12.21□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TNFRSF11BO00300 401 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TMCC2O75069 709 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 KRT36O76013 467 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ERFP50548 548 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MRPS34P82930 218 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TRAP1Q12931 704 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ETFDHQ16134 617 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SGCAQ16586 387 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FAM205BPQ63HN1 556 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 KRT80Q6KB66 452 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 C1orf94Q6P1W5 598 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SMARCD3Q6STE5 483 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TRMT61AQ96FX7 289 aaKnown RBP12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GPX7Q96SL4 187 aaPredicted RBP12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 RNF121Q9H920 327 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SIAEQ9HAT2 523 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IER3IP1Q9Y5U9 82 aa12.2□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MTORP42345 2549 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms