RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CNTNAP1P78357 1384 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 NINLQ9Y2I6 1382 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 CENPJQ9HC77 1338 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 FAM166BA8MTA8 275 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 H0YHG0 523 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 SIRPB1O00241 398 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 CDC7O00311 574 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 PES1O00541 588 aaKnown RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 SS18L1O75177 396 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 CDH16O75309 829 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 KLF8O95600 359 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 GIPP09681 153 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 PSG2P11465 335 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 ZNF24P17028 368 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 CCNCP24863 283 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 RRM2P31350 389 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 SLC26A3P40879 764 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 NMUP48645 174 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 TMED10P49755 219 aaKnown RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 RORCP51449 518 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 RPS15P62841 145 aaKnown RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 REG3AQ06141 175 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 UNC119Q13432 240 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 PSG5Q15238 335 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 RCN1Q15293 331 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 RSPO1Q2MKA7 263 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 PGGHGQ32M88 737 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 PIGGQ5H8A4 983 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 C9orf135Q5VTT2 229 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 CYB5R2Q6BCY4 276 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 LCN12Q6JVE5 192 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 TMEM220Q6QAJ8 160 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 DUX4L9Q6RFH8 374 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 IGFL2Q6UWQ7 119 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 TMEM179Q6ZVK1 233 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 MKXQ8IYA7 352 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 LIX1Q8N485 282 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 PQLC3Q8N755 202 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 ZNF433Q8N7K0 673 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 OR51G1Q8NGK1 321 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 DTX3LQ8TDB6 740 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 NRGNQ92686 78 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 KIFAP3Q92845 792 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 SEH1LQ96EE3 360 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 CCDC126Q96EE4 140 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 ZNF799Q96GE5 643 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 MRPL37Q9BZE1 423 aaKnown RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 GEMIN7Q9H840 131 aaKnown RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 ZNF160Q9HCG1 818 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 ZNF331Q9NQX6 463 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 RBAKQ9NYW8 714 aaPredicted RBP1.76□□□□□ -2.13
CD47-203ENST00000398258 MTCH1Q9NZJ7 389 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 VANGL2Q9ULK5 521 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 TMED5Q9Y3A6 229 aa1.76□□□□□ -2.13
CD47-203ENST00000398258 INSRP06213 1382 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 CDC42BPBQ9Y5S2 1711 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 MAPK8IP3Q9UPT6 1336 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 IGKV6D-21A0A0A0MT36 114 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 GLYATL1P3A0A0U1RQE8 302 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SMCO3A2RU48 225 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SPECC1L-ADORA2AF8WAN1 911 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 LAD1O00515 517 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SUPT3HO75486 399 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 OR2J3O76001 311 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 UTS2O95399 124 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 H6PDO95479 791 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 PNMA6AP0CW24 399 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 ADRB3P13945 408 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 ZNF30P17039 623 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 HRH1P35367 487 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 GPX4P36969 197 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 RPS10P46783 165 aaKnown RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 NCBP2P52298 156 aaKnown RBP eCLIP1.75□□□□□ -2.13
CD47-203ENST00000398258 ZNF133P52736 654 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 C21orf59P57076 290 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 RGS8P57771 180 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 YWHAGP61981 247 aaKnown RBP eCLIP1.75□□□□□ -2.13
CD47-203ENST00000398258 HMGCS1Q01581 520 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 CLINT1Q14677 625 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 PON3Q15166 354 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 MRPL23Q16540 153 aaKnown RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 TMEM183BQ1AE95 376 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 TTLL9Q3SXZ7 439 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 ZNF658BQ4V348 819 aaPredicted RBP1.75□□□□□ -2.13
CD47-203ENST00000398258 SPECC1LQ69YQ0 1117 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 C22orf42Q6IC83 251 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 TEX43Q6ZNM6 134 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 C19orf35Q6ZS72 473 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 LINC00173Q6ZV60 143 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SLC16A14Q7RTX9 510 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 TMEM183AQ8IXX5 376 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 EID2Q8N6I1 236 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 OR4A4PQ8NGN8 299 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 ACTRT1Q8TDG2 376 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 CXorf40AQ8TE69 158 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 SDR42E1Q8WUS8 393 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 C8orf44Q96CB5 159 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 MED8Q96G25 268 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 PKNOX2Q96KN3 472 aa1.75□□□□□ -2.13
CD47-203ENST00000398258 TSNARE1Q96NA8 513 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms