RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RAB36O95755 333 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 NEDD8Q15843 81 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 MEP1BQ16820 701 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 LRFN4Q6PJG9 635 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 DNM1P34Q6PK57 102 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 PRSS48Q7RTY5 328 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 OR10H4Q8NGA5 316 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 ALKBH3Q96Q83 286 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-204ENST00000397443 CNN2Q99439 309 aaKnown RBP18.76■□□□□ 0.59
CPNE1-204ENST00000397443 TTTY10Q9BZA0 68 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 RNF122Q9H9V4 155 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 CLEC2DQ9UHP7 191 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 SH3BGRL2Q9UJC5 107 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 MOKQ9UQ07 419 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 RCE1Q9Y256 329 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 NBASA2RRP1 2371 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 A0A1W2PPL8 197 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 UPK3AO75631 287 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 CDAP32320 146 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 RPS27P42677 84 aaKnown RBP18.76■□□□□ 0.59
CPNE1-204ENST00000397443 SIRPAP78324 504 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 NFATC3Q12968 1075 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 B3GNT6Q6ZMB0 384 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 KCTD8Q6ZWB6 473 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 NUFIP2Q7Z417 695 aaKnown RBP18.76■□□□□ 0.59
CPNE1-204ENST00000397443 RPRMLQ8N4K4 120 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 C9orf106Q8NAJ2 232 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 INTS12Q96CB8 462 aaKnown RBP18.76■□□□□ 0.59
CPNE1-204ENST00000397443 WDR76Q9H967 626 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 BCO1Q9HAY6 547 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 DOCK7Q96N67 2140 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 CACNA1CQ13936 2221 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 KHDRBS3O75525 346 aaKnown RBP18.75■□□□□ 0.59
CPNE1-204ENST00000397443 SBK2P0C263 348 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 GLO1Q04760 184 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 LHFPL3Q86UP9 236 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 C20orf196Q8IYI0 205 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 FAM57AQ8TBR7 257 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 TMEM54Q969K7 222 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 NMD3Q96D46 503 aaKnown RBP18.75■□□□□ 0.59
CPNE1-204ENST00000397443 ULBP2Q9BZM5 246 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 RACGAP1Q9H0H5 632 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 SEC61A2Q9H9S3 476 aa18.75■□□□□ 0.59
CPNE1-204ENST00000397443 MRPS18AQ9NVS2 196 aaKnown RBP18.75■□□□□ 0.59
CPNE1-204ENST00000397443 FOXD3Q9UJU5 478 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-204ENST00000397443 EXOGQ9Y2C4 368 aaKnown RBP18.75■□□□□ 0.59
CPNE1-204ENST00000397443 FIGNL2A6NMB9 653 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 ZNF724A8MTY0 619 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 C12orf71A8MTZ7 269 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 AHCYL1O43865 530 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 KRT33AO76009 404 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 TFP02787 698 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 ETV1P50549 477 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 EMX1Q04741 257 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 HIST3H3Q16695 136 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 ZNF837Q96EG3 531 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 SIGLEC11Q96RL6 698 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 RBM24Q9BX46 236 aaKnown RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 HAO2Q9NYQ3 351 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 SMG1Q96Q15 3661 aaKnown RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 DCKP27707 260 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 AGTR1P30556 359 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 TMED1Q13445 227 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 RTL6Q6ICC9 239 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 ZNF100Q8IYN0 542 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 GPR137CQ8N3F9 429 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 RFLNBQ8N5W9 214 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 CNEP1R1Q8N9A8 125 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 OR6N2Q8NGY6 317 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 WNT2BQ93097 391 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 TMEM45BQ96B21 275 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 CRLF2Q9HC73 371 aa18.74■□□□□ 0.59
CPNE1-204ENST00000397443 FGF20Q9NP95 211 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 DIMT1Q9UNQ2 313 aaKnown RBP18.74■□□□□ 0.59
CPNE1-204ENST00000397443 KALRNO60229 2985 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 IRGMA1A4Y4 181 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 SLC19A2O60779 497 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 MYL12AP19105 171 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 PER3P56645 1201 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 POU4F2Q12837 409 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 TSPO2Q5TGU0 170 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 NSUN5P2Q63ZY6 315 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 SLC25A47Q6Q0C1 308 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 SLC35F2Q8IXU6 374 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 GMPPAQ96IJ6 420 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-204ENST00000397443 PARPBPQ9NWS1 579 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 MRPL22Q9NWU5 206 aaKnown RBP18.73■□□□□ 0.59
CPNE1-204ENST00000397443 TINAGQ9UJW2 476 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 FAM215AQ9Y5M1 114 aa18.73■□□□□ 0.59
CPNE1-204ENST00000397443 PRRG2O14669 202 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 WDR1O75083 606 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 SEC14L2O76054 403 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 GABRA1P14867 456 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 ADAM8P78325 824 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 GGTLC2Q14390 218 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 C1orf185Q5T7R7 199 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 GLB1L2Q8IW92 636 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 UBE2J2Q8N2K1 259 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 POMGNT2Q8NAT1 580 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 CPT1CQ8TCG5 803 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms