RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 MAP2K3P46734 347 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 GPR85P60893 370 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 GLO1Q04760 184 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 PXKQ7Z7A4 578 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 TPRA1Q86W33 373 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 LIPHQ8WWY8 451 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 RGP1Q92546 391 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 LRFN5Q96NI6 719 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 COMMD4Q9H0A8 199 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 SERINC1Q9NRX5 453 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 NKIRAS2Q9NYR9 191 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 AKAP7Q9P0M2 348 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-203ENST00000394269 KLHL13Q9P2N7 655 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 WIF1Q9Y5W5 379 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 OTOGLQ3ZCN5 2332 aa10.01□□□□□ -0.81
TCOF1-203ENST00000394269 CFAP47Q6ZTR5 3102 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 IGHV3-15A0A0B4J1V0 119 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 IGKV1D-43A0A0B4J1Z2 117 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 ANXA2P2A6NMY6 339 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 MS4A18H0YCH9 400 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 WNT11O96014 354 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 ANXA2P07355 339 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 UMODP07911 640 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 JMJD7P0C870 316 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 RCVRNP35243 200 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 CD83Q01151 205 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 IL10RAQ13651 578 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 MS4A18Q3C1V0 323 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 RAET1LQ5VY80 246 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 B3GNTL1Q67FW5 361 aaPredicted RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 MRPL14Q6P1L8 145 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 LINGO2Q7L985 606 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 HIST2H2ABQ8IUE6 130 aaPredicted RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 DTWD2Q8NBA8 298 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 OR2G2Q8NGZ5 317 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 ACOT12Q8WYK0 555 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 TNFSF12-TNFSF13A0A0A6YY99 330 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 A0A0G2JK05 382 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 A0A1W2PPL8 197 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 FAM47E-STBD1D6RA91 191 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 NPIPB7O75200 414 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 UPK3AO75631 287 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 DXOO77932 396 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 THBS2P35442 1172 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 APOBEC1P41238 236 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 HTR3AP46098 478 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 HSF1Q00613 529 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 OC90Q02509 493 aaPredicted RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 ISXQ2M1V0 245 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 DMRTC1Q5HYR2 192 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 EMC4Q5J8M3 183 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 MZT2BQ6NZ67 158 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 CDC20BQ86Y33 519 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 UBQLNLQ8IYU4 475 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 OTOSQ8NHW6 89 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 HGDQ93099 445 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 FRMD6Q96NE9 622 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 SLITRK2Q9H156 845 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 PTGES2Q9H7Z7 377 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 LIN7BQ9HAP6 207 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 MRPL22Q9NWU5 206 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 FBXL3Q9UKT7 428 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 HS3ST3B1Q9Y662 390 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 STK17BO94768 372 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 FGF5P12034 268 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 LCN1P31025 176 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 CDAP32320 146 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 SF3A2Q15428 464 aaKnown RBP10□□□□□ -0.81
TCOF1-203ENST00000394269 SLC18B1Q6NT16 456 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 DCXRQ7Z4W1 244 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 LUZP2Q86TE4 346 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 MISPQ8IVT2 679 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 EXD3Q8N9H8 876 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 RFT1Q96AA3 541 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 EMC9Q9Y3B6 208 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 TMEM14AQ9Y6G1 99 aa10□□□□□ -0.81
TCOF1-203ENST00000394269 M0R296 226 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 TP53I11O14683 189 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 YKT6O15498 198 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 RAMP1O60894 148 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 KLF7O75840 302 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-203ENST00000394269 PNPP00491 289 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 UCHL1P09936 223 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 CCL3P10147 92 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 FOLR3P41439 243 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 DGCR2P98153 550 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 GFOD2Q3B7J2 385 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 CCDC58Q4VC31 144 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 AGAP6Q5VW22 663 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 TMEM205Q6UW68 189 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 ST8SIA1Q92185 356 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 AGAP4Q96P64 663 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 ABHD6Q9BV23 337 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 C12orf10Q9HB07 376 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 CYSLTR2Q9NS75 346 aa9.99□□□□□ -0.81
TCOF1-203ENST00000394269 PADI1Q9ULC6 663 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms