RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 MGRN1O60291 552 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 E2F6O75461 281 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 TXNDC12O95881 172 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 HLA-HP01893 362 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 APEHP13798 732 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 GSTM3P21266 225 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 GUCA1AP43080 201 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 FMODQ06828 376 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 NRN1LQ496H8 165 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF672Q499Z4 452 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 RPL13AP3Q6NVV1 102 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 SLC22A25Q6T423 547 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 C20orf204Q6ZNR8 217 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 RASSF6Q6ZTQ3 369 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 MDP1Q86V88 176 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 SKA3Q8IX90 412 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 OR10G2Q8NGC3 310 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 LILRB1Q8NHL6 650 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 NSMAFQ92636 917 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 GTPBP3Q969Y2 492 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 RASD2Q96D21 266 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 ERMAPQ96PL5 475 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 KCNS3Q9BQ31 491 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 IFT27Q9BW83 186 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 B3GNT2Q9NY97 397 aa16.56■□□□□ 0.24
PDLIM7-204ENST00000393546 IGHV1-18A0A0C4DH31 117 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 SLC22A23A1A5C7 686 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 PRSS37A4D1T9 235 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 SHISA9B4DS77 424 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 ARPC3O15145 178 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 IDH3BO43837 385 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 UBL3O95164 117 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 PPP1R3DO95685 299 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 IGKV3-15P01624 115 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 NPR2P20594 1047 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 IST1P53990 364 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 RAB1AP62820 205 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 PIGFQ07326 219 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 KRR1Q13601 381 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 CCNIQ14094 377 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 GSG1Q2KHT4 349 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 MESTQ5EB52 335 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF620Q6ZNG0 422 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 DPPA2Q7Z7J5 298 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 ADCK1Q86TW2 530 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 CLDN22Q8N7P3 220 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF611Q8N823 705 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 KBTBD8Q8NFY9 601 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 OR52L1Q8NGH7 329 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 UTP4Q969X6 686 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 SH3GL3Q99963 347 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 KCNN2Q9H2S1 579 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 SIAEQ9HAT2 523 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 POU2F3Q9UKI9 436 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 CDH10Q9Y6N8 788 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 CREBBPQ92793 2442 aa16.55■□□□□ 0.24
PDLIM7-204ENST00000393546 IGKV1D-43A0A0B4J1Z2 117 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF503-AS2A6NEH8 195 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ARRDC5A6NEK1 342 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 H7C1C5 153 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 SOCS2O14508 198 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 DEAF1O75398 565 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 TIPRLO75663 272 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ATE1O95260 518 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 IGLV1-44P01699 117 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 CRYAAP02489 173 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 NOS3P29474 1203 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ARHGDIAP52565 204 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 LCN6P62502 163 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 MRPS34P82930 218 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 COX10Q12887 443 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 SGCAQ16586 387 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 SLC16A14Q7RTX9 510 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 TMEM179BQ7Z7N9 219 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 NEUROG1Q92886 237 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 FBXW5Q969U6 566 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 FEVQ99581 238 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 EGLN3Q9H6Z9 239 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 RNF121Q9H920 327 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 SEC61A2Q9H9S3 476 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ARMC1Q9NVT9 282 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 IL20Q9NYY1 176 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 CISD1Q9NZ45 108 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 PDP1Q9P0J1 537 aaPredicted RBP16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ITGB1BP2Q9UKP3 347 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 UGT2A1Q9Y4X1 527 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 AP4S1Q9Y587 144 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 ATP23Q9Y6H3 246 aa16.54■□□□□ 0.24
PDLIM7-204ENST00000393546 RAB36O95755 333 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 CECR9P0C854 216 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 CD53P19397 219 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 CDAP32320 146 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 PTDSS1P48651 473 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 IDH3GP51553 393 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 CDH11P55287 796 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 SPOCK1Q08629 439 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 NPRL3Q12980 569 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 SLC36A2Q495M3 483 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms