RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 LRRC23Q53EV4 343 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-208ENST00000392449 SLC16A14Q7RTX9 510 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 OR8J3Q8NGG0 315 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 C10orf82Q8WW14 230 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 RASSF5Q8WWW0 418 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 GTF3AQ92664 365 aaKnown RBP14.21□□□□□ -0.13
PTPRK-208ENST00000392449 SGTBQ96EQ0 304 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 MRPL13Q9BYD1 178 aaKnown RBP14.21□□□□□ -0.13
PTPRK-208ENST00000392449 SAR1AQ9NR31 198 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 A0A1W2PRG6 482 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 FARS2O95363 451 aaKnown RBP14.2□□□□□ -0.14
PTPRK-208ENST00000392449 HNF1AP20823 631 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 MAGEB1P43366 347 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 CDH15P55291 814 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 RPS23P62266 143 aaKnown RBP14.2□□□□□ -0.14
PTPRK-208ENST00000392449 LAPTM4AQ15012 233 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 RGS7BPQ6MZT1 257 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-208ENST00000392449 CLDN22Q8N7P3 220 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 LINC01356Q8N9X3 169 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 ICA1LQ8NDH6 482 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 TMEM239Q8WW34 195 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 HPS1Q92902 700 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 C1orf159Q96HA4 380 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 TPD52L3Q96J77 140 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 C19orf24Q9BVV8 132 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 MS4A5Q9H3V2 200 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 LPAR2Q9HBW0 351 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 INIPQ9NRY2 104 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF275Q9NSD4 429 aaPredicted RBP14.2□□□□□ -0.14
PTPRK-208ENST00000392449 TAAR3PQ9P1P4 343 aa14.2□□□□□ -0.14
PTPRK-208ENST00000392449 OR5F1O95221 314 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 ACADSP16219 412 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 LSP1P33241 339 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 ARFIP2P53365 341 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 GLO1Q04760 184 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 TOP3AQ13472 1001 aaPredicted RBP14.19□□□□□ -0.14
PTPRK-208ENST00000392449 NKPD1Q17RQ9 610 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 CYBRD1Q53TN4 286 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 ARMC4Q5T2S8 1044 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 TMEM53Q6P2H8 277 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 RINLQ6ZS11 566 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 RBM15BQ8NDT2 890 aaKnown RBP14.19□□□□□ -0.14
PTPRK-208ENST00000392449 CLDND2Q8NHS1 167 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 NSMAFQ92636 917 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 HDAC2Q92769 488 aaKnown RBP14.19□□□□□ -0.14
PTPRK-208ENST00000392449 SEPHS2Q99611 448 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 CDH20Q9HBT6 801 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 ARGLU1Q9NWB6 273 aaPredicted RBP14.19□□□□□ -0.14
PTPRK-208ENST00000392449 FBXL3Q9UKT7 428 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 BAG5Q9UL15 447 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 UGT2A1Q9Y4X1 527 aa14.19□□□□□ -0.14
PTPRK-208ENST00000392449 FAM157AC9JC47 383 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 LCKP06239 509 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 MMP7P09237 267 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 TROVE2P10155 538 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 RBM34P42696 430 aaKnown RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 GPR6P46095 362 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 YAP1P46937 504 aaKnown RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF84P51523 738 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 SLC36A2Q495M3 483 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 IGFN1Q86VF2 1251 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 MICU2Q8IYU8 434 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 CPEB3Q8NE35 698 aaKnown RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 RDH5Q92781 318 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 SH3GL1Q99961 368 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 ARMCX1Q9P291 453 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 RHCGQ9UBD6 479 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 TMEFF2Q9UIK5 374 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 SNX13Q9Y5W8 968 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 ANK2Q01484 3957 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 CDC14BO60729 498 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 SAGP10523 405 aaPredicted RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 KDELR2P33947 212 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 THBS2P35442 1172 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 DAP3P51398 398 aaKnown RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 CCL8P80075 99 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 TBC1D28Q2M2D7 210 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 PABPC1L2AQ5JQF8 200 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 TMEM255AQ5JRV8 349 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 POU5F2Q8N7G0 328 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 NABP1Q96AH0 204 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 RCN3Q96D15 328 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 NMD3Q96D46 503 aaKnown RBP14.18□□□□□ -0.14
PTPRK-208ENST00000392449 TREM2Q9NZC2 230 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 A4GNTQ9UNA3 340 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 MED31Q9Y3C7 131 aa14.18□□□□□ -0.14
PTPRK-208ENST00000392449 BBIP1A8MTZ0 92 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 FAM220BPB1ANY3 271 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 J3KTA2 159 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
PTPRK-208ENST00000392449 RP2O75695 350 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 TSPAN19P0C672 248 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 ZNF250P15622 560 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 ACHEP22303 614 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 CCNOP22674 350 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 UCP2P55851 309 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 KLF3P57682 345 aaPredicted RBP14.17□□□□□ -0.14
PTPRK-208ENST00000392449 CD47Q08722 323 aa14.17□□□□□ -0.14
PTPRK-208ENST00000392449 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
PTPRK-208ENST00000392449 COQ5Q5HYK3 327 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms