RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 BCHEP06276 602 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 SERPINB5P36952 375 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 RORCP51449 518 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 PDK3Q15120 406 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 CCDC152Q4G0S7 254 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 DNLZQ5SXM8 178 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 NTM-AS1Q6ZSK4 140 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 NOXO1Q8NFA2 376 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 STEAP2Q8NFT2 490 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 ESR2Q92731 530 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 TMEM54Q969K7 222 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 IFT74Q96LB3 600 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 PARP12Q9H0J9 701 aaKnown RBP2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 GPATCH2LQ9NWQ4 482 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 PSG8Q9UQ74 426 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 PTPRTO14522 1441 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 IGLV3-12A0A075B6K2 115 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 TMEM223A0PJW6 202 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 HIDE1A8MVS5 230 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 RAB3DO95716 219 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 RNASE2P10153 161 aaKnown RBP2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 CX3CR1P49238 355 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 FBXW4P57775 412 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 IRX3P78415 501 aaPredicted RBP2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 LOXL1Q08397 574 aaPredicted RBP2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 RABL6Q3YEC7 729 aaPredicted RBP2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 CREB3L1Q96BA8 519 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 PANX2Q96RD6 677 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 P2RX4Q99571 388 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZSCAN5AQ9BUG6 496 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 TMEM59Q9BXS4 323 aa2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 RPF2Q9H7B2 306 aaKnown RBP2.94□□□□□ -1.94
SNORA40.4-201ENST00000390971 C15orf38-AP3S2A0A0A6YYH1 394 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 RAD51BO15315 384 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 GMFGO60234 142 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 HLA-DPB1P04440 258 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 GNAO1P09471 354 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 CALM1P0DP23 149 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 CALM2P0DP24 149 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 CALM3P0DP25 149 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 SF3A2Q15428 464 aaKnown RBP2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 XKR4Q5GH76 650 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 LRRC74BQ6ZQY2 392 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 ABHD3Q8WU67 409 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 TBC1D31Q96DN5 1066 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 FOXC2Q99958 501 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 TRIM62Q9BVG3 475 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 SYNDIG1Q9H7V2 258 aa2.93□□□□□ -1.94
SNORA40.4-201ENST00000390971 DYNC1I1O14576 645 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 NDC80O14777 642 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZNF208O43345 1280 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 RP2O75695 350 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 HRH1P35367 487 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 EPS15P42566 896 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 RFX3P48380 749 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZNF77Q15935 545 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 FAM78AQ5JUQ0 283 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 TEX43Q6ZNM6 134 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 MMAAQ8IVH4 418 aaKnown RBP2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 FAM3DQ96BQ1 224 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 RBMXL1Q96E39 390 aaKnown RBP2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 PLEKHA8Q96JA3 519 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 PSKH2Q96QS6 385 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZNF382Q96SR6 550 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 FMO2Q99518 471 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 SLC39A3Q9BRY0 314 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 TCHPQ9BT92 498 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 SLC25A2Q9BXI2 301 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 ANKRD19PQ9H560 264 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 PIGLQ9Y2B2 252 aa2.92□□□□□ -1.94
SNORA40.4-201ENST00000390971 BRWD3Q6RI45 1802 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 SNTNA6NMZ2 147 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 SGK1O00141 431 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZNF207O43670 478 aaKnown RBP2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 TIMM8AO60220 97 aaPredicted RBP2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 SOX15O60248 233 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 UTS2O95399 124 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 OAFQ86UD1 273 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 LGI3Q8N145 548 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 OSR2Q8N2R0 312 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 NECAP1Q8NC96 275 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 RNF139Q8WU17 664 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 NARS2Q96I59 477 aaKnown RBP2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 DOK1Q99704 481 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 UBE2ZQ9H832 354 aaPredicted RBP2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 MRPS18BQ9Y676 258 aaKnown RBP2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 GPR179Q6PRD1 2367 aa2.91□□□□□ -1.94
SNORA40.4-201ENST00000390971 CLRN2A0PK11 232 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 C1orf105O95561 183 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CEACAM6P40199 344 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CDKN1BP46527 198 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CDH4P55283 916 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CLINT1Q14677 625 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CALHM3Q86XJ0 350 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 PRSS58Q8IYP2 241 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 L3HYPDHQ96EM0 354 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 PIK3IP1Q96FE7 263 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 ZNF681Q96N22 645 aa2.9□□□□□ -1.95
SNORA40.4-201ENST00000390971 CTSFQ9UBX1 484 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms