RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TRAV25A0A0B4J276 109 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 GLYATL1P3A0A0U1RQE8 302 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 A0A1B0GTQ1 180 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PRSS37A4D1T9 235 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LYRM9A8MSI8 78 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 GOLGA8TH3BQL2 631 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LAD1O00515 517 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CHST1O43916 411 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 EIF4E2O60573 245 aaKnown RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 DNAJB6O75190 326 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 NPIPB7O75200 414 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 RAB3DO95716 219 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 SERPINA5P05154 406 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PLEKP08567 350 aaPredicted RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 OR8G3PP0DMU2 310 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 IGHV3-43DP0DP04 118 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 MSR1P21757 451 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 BCKDHBP21953 392 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CTRLP40313 264 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PEX19P40855 299 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 AQP2P41181 271 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 VSX2P58304 361 aaPredicted RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 HERVK_113P61574 105 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 HERPUD1Q15011 391 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 WDR43Q15061 677 aaKnown RBP eCLIP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 SGCAQ16586 387 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ALKBH6Q3KRA9 238 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ZBED5Q49AG3 693 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PPM1LQ5SGD2 360 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LY6G6FQ5SQ64 297 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 THEM4Q5T1C6 240 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ANKRD22Q5VYY1 191 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LCN12Q6JVE5 192 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 SPESP1Q6UW49 350 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 Q6ZSR3 168 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 COX15Q7KZN9 410 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 HDDC2Q7Z4H3 204 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 TMEM150AQ86TG1 271 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 KATNAL2Q8IYT4 538 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 RNF175Q8N4F7 328 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 JAGN1Q8N5M9 183 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 TTC29Q8NA56 475 aaPredicted RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 HSD17B11Q8NBQ5 300 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 OR10R2Q8NGX6 335 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LYPD6BQ8NI32 183 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ZNF502Q8TBZ5 544 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 BLOC1S5Q8TDH9 187 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 GLYATL2Q8WU03 294 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 NRGNQ92686 78 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 MYDGFQ969H8 173 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 EXOSC8Q96B26 276 aaKnown RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 RPUSD4Q96CM3 377 aaKnown RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 SERPINB12Q96P63 405 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 OPALINQ96PE5 141 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PLEKHF1Q96S99 279 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ELOVL6Q9H5J4 265 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CCNB1IP1Q9NPC3 277 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CHRAC1Q9NRG0 131 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PLSCR3Q9NRY6 295 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PEF1Q9UBV8 284 aaKnown RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 PCYOX1Q9UHG3 505 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 LSM7Q9UK45 103 aaKnown RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 SLC17A4Q9Y2C5 497 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 ZNF256Q9Y2P7 627 aaPredicted RBP2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CACNG2Q9Y698 323 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 CNTNAP1P78357 1384 aa2.05□□□□□ -2.08
TRAJ40-201ENST00000390497 IGKV1D-13A0A0B4J2D9 117 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 GOLGA6L7A0A1B0GV03 622 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 M0R3G1 203 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 WDR62O43379 1518 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 CLDN11O75508 207 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 IGKV1-13P0DP09 117 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 WARSP23381 471 aaKnown RBP2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 OMGP23515 440 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 F2RP25116 425 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 RBMXP38159 391 aaKnown RBP2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 HCFC1P51610 2035 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 CAV2P51636 162 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 ACTA2P62736 377 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 ACTG2P63267 376 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 ACTC1P68032 377 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 ACTA1P68133 377 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 HMGCS1Q01581 520 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 RAD51Q06609 339 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 SMARCB1Q12824 385 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 IFT88Q13099 833 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 SELENBP1Q13228 472 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 NCF4Q15080 339 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 MPPED2Q15777 294 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 RNF212Q495C1 297 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 PLCXD3Q63HM9 321 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 IL34Q6ZMJ4 242 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 TEX43Q6ZNM6 134 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 ASCL5Q7RTU5 278 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 CMTM1Q8IZ96 169 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 TMEM61Q8N0U2 210 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 PRELID2Q8N945 189 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 CARMIL3Q8ND23 1372 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 OR2A1Q8NGT9 310 aa2.04□□□□□ -2.08
TRAJ40-201ENST00000390497 MARCH1Q8TCQ1 289 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms