RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LHFPL4Q7Z7J7 247 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ACOT1Q86TX2 421 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CERS3Q8IU89 383 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CBWD2Q8IUF1 395 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MISPQ8IVT2 679 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CDKL3Q8IVW4 592 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF101Q8IZC7 436 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 OR2L13Q8N349 312 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 DHRSXQ8N5I4 330 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TMCO5AQ8N6Q1 288 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 OR10A7Q8NGE5 316 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 OR6N1Q8NGY5 312 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 GDAP1Q8TB36 358 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PIFOQ8TCI5 191 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 URGCPQ8TCY9 931 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 LKAAEAR1Q8TD35 194 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 DQX1Q8TE96 717 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 BLNKQ8WV28 456 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 EMG1Q92979 244 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SNX21Q969T3 373 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 EEF2KMTQ96G04 330 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZMAT2Q96NC0 199 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZFP3Q96NJ6 502 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TESK2Q96S53 571 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 RUFY1Q96T51 708 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TIMM17AQ99595 171 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 C1orf50Q9BV19 199 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PARP12Q9H0J9 701 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 DSN1Q9H410 356 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SAV1Q9H4B6 383 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZWILCHQ9H900 591 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 FN3KRPQ9HA64 309 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MRPL47Q9HD33 250 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 FBXO8Q9NRD0 319 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 C8orf17Q9NRJ1 99 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 AGPAT5Q9NUQ2 364 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 HMG20BQ9P0W2 317 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TRIM10Q9UDY6 481 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 DNPEPQ9ULA0 475 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 FOXJ3Q9UPW0 622 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 AK6Q9Y3D8 172 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 STRAPQ9Y3F4 350 aaKnown RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ATP6V0A2Q9Y487 856 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TSSC4Q9Y5U2 329 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PLXNA3P51805 1871 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 STRCP1A6NGW2 1772 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 KDRP35968 1356 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ROS1P08922 2347 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 BAZ2AQ9UIF9 1905 aaKnown RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 IGLV3-22A0A075B6J6 115 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TRGV4A0A0C4DH28 118 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 IGHV1-3A0A0C4DH29 117 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 A0A0J9YXV3 536 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TCRBV9S1A1TA0A576 114 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ARHGAP42A6NI28 874 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 GPR89AB7ZAQ6 455 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PRAMEF26H0Y7S4 382 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 C15orf65H3BRN8 121 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 SDHDO14521 159 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RGS16O15492 202 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 REM1O75628 298 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 UPK3AO75631 287 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TOM1L1O75674 476 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 GLSO94925 669 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 SCELO95171 688 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CPSF4O95639 269 aaKnown RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CAPN1P07384 714 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CTSGP08311 255 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 GPR89BP0CG08 455 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CALM1P0DP23 149 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CALM2P0DP24 149 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CALM3P0DP25 149 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TCN1P20061 433 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TPSB2P20231 275 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 NTF3P20783 257 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PSMA2P25787 234 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 LOXP28300 417 aaPredicted RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 HRH1P35367 487 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 MAS1LP35410 378 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CDKN1BP46527 198 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 NPBWR2P48146 333 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PRLHRP49683 370 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ACOT2P49753 483 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PLA2G16P53816 162 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PRMT2P55345 433 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CRADDP78560 199 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 NUCB2P80303 420 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 IL5RAQ01344 420 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 DMC1Q14565 340 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TPSAB1Q15661 275 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CCDC40Q4G0X9 1142 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 PTPN20Q4JDL3 420 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 KLHL12Q53G59 568 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 YIF1BQ5BJH7 314 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 CARD16Q5EG05 197 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 RNASE13Q5GAN3 156 aaKnown RBP-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 TEX30Q5JUR7 227 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ANKRD22Q5VYY1 191 aa-0.04□□□□□ -2.42
SNORD28-201ENST00000384706 ZFAND6Q6FIF0 208 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms