RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TPT1P13693 172 aaKnown RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 HTD2P86397 168 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 AKR1C1Q04828 323 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 PELI3Q8N2H9 469 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 PLPP7Q8NBV4 271 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 GNB4Q9HAV0 340 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 DOCK2Q92608 1830 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 F8W036 122 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 LGI1O95970 557 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 DEFA4P12838 97 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 MPLP40238 635 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 BLOC1S1P78537 153 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ACVR1Q04771 509 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 MFGE8Q08431 387 aaPredicted RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 SELENBP1Q13228 472 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 SPCS2Q15005 226 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 CMPK2Q5EBM0 449 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 C16orf52Q8NHV5 167 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 CENPOQ9BU64 300 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ANKRD12Q6UB98 2062 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 HRO43593 1189 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 RGS11O94810 467 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 CPT2P23786 658 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 MVB12AQ96EY5 273 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ABHD6Q9BV23 337 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 LAT2Q9GZY6 243 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 PSORS1C1Q9UIG5 152 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 RPA2P15927 270 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 PRKACAP17612 351 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 RAB6AP20340 208 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 MMP11P24347 488 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 SLC6A12P48065 614 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CLDN15P56746 228 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 FXNQ16595 210 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 LYPD4Q6UWN0 246 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 GFRALQ6UXV0 394 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 STMND1H3BQB6 276 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 GPX2P18283 190 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 YIF1BQ5BJH7 314 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 FRZBQ92765 325 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 WSB2Q9NYS7 404 aaPredicted RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 MSTNO14793 375 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CXCL13O43927 109 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 B4GALT3O60512 393 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 GUSBP08236 651 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CDK4P11802 303 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 GLIPR1L1Q6UWM5 242 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 IDO2Q6ZQW0 420 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 SPRED1Q7Z699 444 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 PARP16Q8N5Y8 322 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 ISL2Q96A47 359 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 CPNE5Q9HCH3 593 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 PMP2P02689 132 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 EMP3P54852 163 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CLVS2Q5SYC1 327 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 DHRS13Q6UX07 377 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 DNAJC5GQ8N7S2 189 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 PRELID3BQ9Y3B1 194 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 URB1O60287 2271 aaKnown RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 VAMP5O95183 116 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 CNIH1O95406 144 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 SFXN4Q6P4A7 337 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 ARSGQ96EG1 525 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 TCEAL2Q9H3H9 227 aaPredicted RBP12.47□□□□□ -0.41
GPC6-201ENST00000377047 C1orf123Q9NWV4 160 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 POMT2Q9UKY4 750 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 SLC17A4Q9Y2C5 497 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
GPC6-201ENST00000377047 TMEM82A0PJX8 343 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 H7C1Q1 480 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 NXPH3O95157 252 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 SCG5P05408 212 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 THBS1P07996 1170 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.41
GPC6-201ENST00000377047 GNB2P62879 340 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 ZNF385BQ569K4 471 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 TRILQ7L0X0 811 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms