RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FDX2Q6P4F2 183 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 POC5Q8NA72 575 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR5M1Q8NGP8 315 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR1J4Q8NGS1 313 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR5B2Q96R09 309 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR14A2Q96R54 314 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 POLE4Q9NR33 117 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 IKZF2Q9UKS7 526 aa16.12■□□□□ 0.17
HLA-DQB1-201ENST00000374943 LOC102725191A0A1B0GVB3 256 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 FUOMA2VDF0 154 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ZNF879B4DU55 563 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MASP2O00187 686 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 EVX1P49640 407 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 BCAP31P51572 246 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SPEM2Q0P670 501 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ETFDHQ16134 617 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 HES3Q5TGS1 186 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ZNF468Q5VIY5 522 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 THEM6Q8WUY1 208 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RGP1Q92546 391 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MIB2Q96AX9 1013 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 UBL7Q96S82 380 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 B3GNT4Q9C0J1 378 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CACNA1CQ13936 2221 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ARPC4-TTLL3A0A0A6YYG9 625 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PMS2P2O95744 297 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR2B6P58173 313 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SLC35A1P78382 337 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PCK2Q16822 640 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 HSD17B12Q53GQ0 312 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TEX30Q5JUR7 227 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 IDNKQ5T6J7 187 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CNIH2Q6PI25 160 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 DHRS13Q6UX07 377 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 HDDC2Q7Z4H3 204 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 GLRX5Q86SX6 157 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PIP4P1Q86T03 277 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 WDFY1Q8IWB7 410 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 UEVLDQ8IX04 471 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SLC26A10Q8NG04 563 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 HSD17B8Q92506 261 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TXNDC15Q96J42 360 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AMELYQ99218 206 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TMEM185BQ9H7F4 350 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MED29Q9NX70 200 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SLCO1C1Q9NYB5 712 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 FRRS1LQ9P0K9 344 aa16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 COA3Q9Y2R0 106 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-201ENST00000374943 KNTC1P50748 2209 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TRBV5-5A0A0J9YX44 114 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 A0A1W2PNR3 127 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AQP7P3A6NL99 342 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR4C45A6NMZ5 311 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 NOTOA8MTQ0 251 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PROB1E7EW31 1015 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ZIC3O60481 467 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 KHDRBS3O75525 346 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CBR3O75828 277 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ZNF432O94892 652 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RPP14O95059 124 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 HRGP04196 525 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 IL7P13232 177 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TCEA1P23193 301 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RPS27P42677 84 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR10A3P58181 314 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ADAM8P78325 824 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SLC17A1Q14916 467 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TMEM176BQ3YBM2 270 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 KCTD18Q6PI47 426 aaPredicted RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ASCL5Q7RTU5 278 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ZNF679Q8IYX0 411 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR8H2Q8N162 312 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR2G2Q8NGZ5 317 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OR5AK2Q8NH90 309 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 NSMAFQ92636 917 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 OXGR1Q96P68 337 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MRPL13Q9BYD1 178 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 PPP1R3EQ9H7J1 279 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 C14orf119Q9NWQ9 140 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 DKKL1Q9UK85 242 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RASD1Q9Y272 281 aa16.1■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TMEM212A6NML5 194 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TRAF3IP2O43734 574 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 TMEM127O75204 238 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 SPARCP09486 303 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 MAPK3P27361 379 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 APEX1P27695 318 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 DLSTP36957 453 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 BIDP55957 195 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 FMODQ06828 376 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 RASGEF1BQ0VAM2 473 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CSRP2Q16527 193 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 BAK1Q16611 211 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 CEP78Q5JTW2 689 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 ACER2Q5QJU3 275 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 AGAP7PQ5VUJ5 663 aa16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 JMJD6Q6NYC1 403 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQB1-201ENST00000374943 LRRC69Q6ZNQ3 347 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms