RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CD1AP06126 327 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 DPP4P27487 766 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 MFGE8Q08431 387 aaPredicted RBP14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 C17orf67Q0P5P2 114 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 MS4A18Q3C1V0 323 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 UBE2NLQ5JXB2 153 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 ZNF385CQ66K41 422 aaPredicted RBP14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 KCTD20Q7Z5Y7 419 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 TSEN15Q8WW01 171 aaKnown RBP14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 HGDQ93099 445 aa14.37□□□□□ -0.11
CNKSR1-202ENST00000374253 EFNA2O43921 213 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 FCER2P06734 321 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 SYPP08247 313 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 CCKBRP32239 447 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 PUDPQ08623 228 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 SNTA1Q13424 505 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 EIF2B1Q14232 305 aaKnown RBP14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 HYAL4Q2M3T9 481 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 PRAMEF20Q5VT98 475 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 CORO6Q6QEF8 472 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 SYNPRQ8TBG9 265 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 HAVCR2Q8TDQ0 301 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 EDAQ92838 391 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 C5orf34Q96MH7 638 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 FBXL3Q9UKT7 428 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 FKBP7Q9Y680 259 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 A0A0A6YYJ9 748 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 ANKUB1A6NFN9 424 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 EFR3AQ14156 821 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 BEST4Q8NFU0 473 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 TMEM234Q8WY98 164 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 C4orf45Q96LM5 186 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 GTPBP2Q9BX10 602 aaKnown RBP14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 COMMD4Q9H0A8 199 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 METTL7AQ9H8H3 244 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 NKIRAS2Q9NYR9 191 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 PPP4R1LQ9P1A2 415 aa14.36□□□□□ -0.11
CNKSR1-202ENST00000374253 ANXA2P2A6NMY6 339 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 EIF1AYO14602 144 aaKnown RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 PDCD5O14737 125 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 ANXA2P07355 339 aaKnown RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 CCL4P13236 92 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 HLA-DMAP28067 261 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 GDNFP39905 211 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 MMP15P51511 669 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TLE3Q04726 772 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 FAAP20Q6NZ36 180 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 NUP54Q7Z3B4 507 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 KRT77Q7Z794 578 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 GLB1L2Q8IW92 636 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 OR8B4Q96RC9 309 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 MOV10Q9HCE1 1003 aaKnown RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 MYOTQ9UBF9 498 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 KLK11Q9UBX7 282 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 FBXL2Q9UKC9 423 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 CAMK2AQ9UQM7 478 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TMEM14AQ9Y6G1 99 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 RTTNQ86VV8 2226 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TRIM3O75382 744 aaPredicted RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 PNLIPP16233 465 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 EIF1AXP47813 144 aaKnown RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 EGR3Q06889 387 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 SLC17A1Q14916 467 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TMEM255AQ5JRV8 349 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 SFRP4Q6FHJ7 346 aaPredicted RBP14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TMEM53Q6P2H8 277 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 LRRTM1Q86UE6 522 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 NOXA1Q86UR1 476 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 OR52I2Q8NH67 350 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 NUBPLQ8TB37 319 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 CREB3L1Q96BA8 519 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 RNF170Q96K19 258 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 GAL3ST1Q99999 423 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 ABHD6Q9BV23 337 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 SLITRK2Q9H156 845 aa14.35□□□□□ -0.11
CNKSR1-202ENST00000374253 TRBV5-5A0A0J9YX44 114 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 A0A1W2PNR3 127 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 NPIPA5E9PKD4 350 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 OR2T1O43869 369 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 MRPL28Q13084 256 aaKnown RBP14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 BTBD16Q32M84 506 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 Q5BKY6 102 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 SLC18B1Q6NT16 456 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 ZNF248Q8NDW4 579 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 STK35Q8TDR2 534 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 DACT3Q96B18 629 aaPredicted RBP14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 MRPL39Q9NYK5 338 aaKnown RBP14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 VSX1Q9NZR4 365 aaPredicted RBP14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 NPIPA1Q9UND3 350 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 RCE1Q9Y256 329 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 VSTM2BA6NLU5 285 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 TRAPPC2P0DI81 140 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 TRAPPC2BP0DI82 140 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 CDK2P24941 298 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 RRAS2P62070 204 aaPredicted RBP14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 PITPNAQ00169 270 aa14.34□□□□□ -0.11
CNKSR1-202ENST00000374253 UBALD2Q8IYN6 164 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms