RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ZNF24P17028 368 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 GADD45AP24522 165 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 BMXP51813 675 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 GLO1Q04760 184 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 SSX1Q16384 188 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 VASNQ6EMK4 673 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 TIGD4Q8IY51 512 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 MEIOBQ8N635 442 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF485Q8NCK3 441 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 NOXO1Q8NFA2 376 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 OR6X1Q8NH79 312 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 ROBO4Q8WZ75 1007 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF845Q96IR2 970 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 RBP7Q96R05 134 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 INTS14Q96SY0 518 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 B3GNT3Q9Y2A9 372 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 APC2O95996 2303 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 DMXL2Q8TDJ6 3036 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 AKAP8O43823 692 aaKnown RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 PGA4P0DJD7 388 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 PGA3P0DJD8 388 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 CLDN18P56856 261 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 SLC17A1Q14916 467 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 POU4F3Q15319 338 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 CTF1Q16619 201 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 ASB18Q6ZVZ8 466 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 CREB3L2Q70SY1 520 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 KLBQ86Z14 1044 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 NEIL3Q8TAT5 605 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 RPL3LQ92901 407 aaKnown RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 C4orf36Q96KX1 117 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 MFRPQ9BY79 579 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 WDR76Q9H967 626 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 COPS3Q9UNS2 423 aa17.32■□□□□ 0.36
CHTOP-204ENST00000368694 COA3Q9Y2R0 106 aaPredicted RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 PCDHGA9Q9Y5G4 932 aaKnown RBP17.32■□□□□ 0.36
CHTOP-204ENST00000368694 DNAJC13O75165 2243 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 J3QLW9 94 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 AIREO43918 545 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 SULT1C4O75897 302 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF708P17019 499 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF19P17023 458 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF182P17025 639 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-204ENST00000368694 BLVRAP53004 296 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ACTA2P62736 377 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ACTG2P63267 376 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 RGS21Q2M5E4 152 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ZFP41Q8N8Y5 198 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 SNX33Q8WV41 574 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 UFD1Q92890 307 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ADAD1Q96M93 576 aaKnown RBP17.31■□□□□ 0.36
CHTOP-204ENST00000368694 MRPL13Q9BYD1 178 aaKnown RBP17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ZDHHC11Q9H8X9 412 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 ACACAQ13085 2346 aa17.31■□□□□ 0.36
CHTOP-204ENST00000368694 TRGV5A0A0B4J1U4 118 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 LOC100506127A0A0U1RQW1 187 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF670-ZNF695F2Z2N8 137 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 LALBAP00709 142 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 MT-ND5P03915 603 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 CPEP16870 476 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 NCCRP1Q6ZVX7 275 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 NSMAFQ92636 917 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 ITPKCQ96DU7 683 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF385AQ96PM9 386 aaKnown RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 TIMP4Q99727 224 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 SF3B5Q9BWJ5 86 aaKnown RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 OR51E2Q9H255 320 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 ISYNA1Q9NPH2 558 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 CEP295Q9C0D2 2601 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 IGKV1D-43A0A0B4J1Z2 117 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 ACTL6AO96019 429 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 RPS27P42677 84 aaKnown RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 OR12D2P58182 307 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 RPS3AP61247 264 aaKnown RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 VBP1P61758 197 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 THEM4Q5T1C6 240 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 OTPQ5XKR4 325 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 DPY19L4Q7Z388 723 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 PHC2Q8IXK0 858 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 MRPL48Q96GC5 212 aaKnown RBP17.3■□□□□ 0.36
CHTOP-204ENST00000368694 BCL7BQ9BQE9 202 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 TMEM165Q9HC07 324 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 NDUFB11Q9NX14 153 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 DKK4Q9UBT3 224 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 LAMP5Q9UJQ1 280 aa17.3■□□□□ 0.36
CHTOP-204ENST00000368694 KHDRBS3O75525 346 aaKnown RBP17.29■□□□□ 0.36
CHTOP-204ENST00000368694 ADAM8P78325 824 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF169Q14929 603 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-204ENST00000368694 TIMM50Q3ZCQ8 353 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 TP53I3Q53FA7 332 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 IGFL3Q6UXB1 125 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 FCRLAQ7L513 359 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 ATCAYQ86WG3 371 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 ZNF775Q96BV0 537 aaPredicted RBP17.29■□□□□ 0.36
CHTOP-204ENST00000368694 CHCHD6Q9BRQ6 235 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 TRIM36Q9NQ86 728 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 BABAM2Q9NXR7 383 aa17.29■□□□□ 0.36
CHTOP-204ENST00000368694 MKRN2OSH3BPM6 223 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms