RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RPRD1BQ9NQG5 326 aaKnown RBP12.2□□□□□ -0.46
TPM3-211ENST00000368531 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 USE1Q9NZ43 259 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 PLEKHB1Q9UF11 243 aaPredicted RBP12.2□□□□□ -0.46
TPM3-211ENST00000368531 NDRG3Q9UGV2 375 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 KLHL21Q9UJP4 597 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 UBR5O95071 2799 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 SH3D21A4FU49 640 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 OR6C68A6NDL8 312 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 RIIAD1A6NNX1 92 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 FAM171A2A8MVW0 826 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 ZNF99A8MXY4 864 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 SNAP29O95721 258 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 IFNGP01579 166 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 NR2C1P13056 603 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 B4GALT1P15291 398 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 CTLA4P16410 223 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 KIR2DL3P43628 341 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 CAPZA2P47755 286 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 RAD23AP54725 363 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 SORDQ00796 357 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 NPRL3Q12980 569 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 CRMP1Q14194 572 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 SGCAQ16586 387 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 TBRG1Q3YBR2 411 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 ZNF362Q5T0B9 420 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 OR7E24Q6IFN5 339 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 ANKRD16Q6P6B7 361 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 DMRTC2Q8IXT2 367 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 SLC37A3Q8NCC5 494 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 NPEPL1Q8NDH3 523 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 OR9Q1Q8NGQ5 310 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 FNDC8Q8TC99 324 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 BCL2L2Q92843 193 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 PLEKHA8Q96JA3 519 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 MUS81Q96NY9 551 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 NUAK2Q9H093 628 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 MED20Q9H944 212 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 TMEM38BQ9NVV0 291 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 VSX1Q9NZR4 365 aaPredicted RBP12.19□□□□□ -0.46
TPM3-211ENST00000368531 ENOPH1Q9UHY7 261 aa12.19□□□□□ -0.46
TPM3-211ENST00000368531 FAM183AA6NL82 134 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 M0R129 80 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 DCTN6O00399 190 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 AHCYL1O43865 530 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 MGRN1O60291 552 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 GPANK1O95872 356 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 HMGN1P05114 100 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 ZNF3P17036 446 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 HOXC12P31275 282 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 PYCR1P32322 319 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 SH3BGRP55822 239 aaPredicted RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 UBE2NP61088 152 aaKnown RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 TAB1Q15750 504 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 SNAPC1Q16533 368 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 C10orf128Q5T292 105 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 LRRC18Q8N456 261 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 MUCL1Q96DR8 90 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 GABARAPL3Q9BY60 117 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 NELFAQ9H3P2 528 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 TOR3AQ9H497 397 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 B9D1Q9UPM9 204 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 COA3Q9Y2R0 106 aaPredicted RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 UGT2A1Q9Y4X1 527 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 DOPEY2Q9Y3R5 2298 aa12.18□□□□□ -0.46
TPM3-211ENST00000368531 SPTBN1Q01082 2364 aaKnown RBP12.18□□□□□ -0.46
TPM3-211ENST00000368531 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 ZAR1LA6NP61 321 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 CASKO14936 926 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 CASQ2O14958 399 aaPredicted RBP12.17□□□□□ -0.46
TPM3-211ENST00000368531 SURF4O15260 269 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 MPZL1O95297 269 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 ATP6V1G2O95670 118 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 GYPBP06028 91 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 THBDP07204 575 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 CLUP10909 449 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 CD79AP11912 226 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 COX6B1P14854 86 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 GUCA1AP43080 201 aaPredicted RBP12.17□□□□□ -0.46
TPM3-211ENST00000368531 PCYT1AP49585 367 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 ZNF133P52736 654 aaPredicted RBP12.17□□□□□ -0.46
TPM3-211ENST00000368531 PIGFQ07326 219 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 PPA1Q15181 289 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 TIMM23BQ5SRD1 257 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 OGFRL1Q5TC84 451 aaPredicted RBP12.17□□□□□ -0.46
TPM3-211ENST00000368531 SLX4IPQ5VYV7 408 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 PLBD1Q6P4A8 553 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 DNM1P34Q6PK57 102 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 SKA3Q8IX90 412 aa12.17□□□□□ -0.46
TPM3-211ENST00000368531 OR6V1Q8N148 313 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms