RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TIMP4Q99727 224 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF649Q9BS31 505 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 CDADC1Q9BWV3 514 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 HDHD5Q9BXW7 423 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 PRRG3Q9BZD7 231 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 ADAM19Q9H013 955 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 SLC22A4Q9H015 551 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 CDCP1Q9H5V8 836 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 ADGRL4Q9HBW9 690 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 BRD7Q9NPI1 651 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 FBXO8Q9NRD0 319 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 GLRX2Q9NS18 164 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 SNTG1Q9NSN8 517 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 TAS2R10Q9NYW0 307 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 TMED7Q9Y3B3 224 aa4.59□□□□□ -1.67
ATXN3-202ENST00000359366 ANKRD11Q6UB99 2663 aaPredicted RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 A0A0G2JMM0 328 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SPAARA0A1B0GVQ0 90 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1W2PPB8 328 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1W2PPK0 400 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1W2PQL4 384 aaPredicted RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1W2PRS3 328 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 DAPL1A0PJW8 107 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 KIR3DP1A8MWS1 328 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 LINC00587B1AMM8 73 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 J3QLW9 94 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 EIF1BO60739 113 aaKnown RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SLC25A12O75746 678 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 NCR1O76036 304 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 APOA1P02647 267 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 TFP02787 698 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 S100A8P05109 93 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 GUSBP08236 651 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CCL3P10147 92 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 TFPIP10646 304 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PNMTP11086 282 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF19P17023 458 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SLC2A5P22732 501 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SHC1P29353 583 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ACVR1BP36896 505 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PTGDSP41222 190 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 FOLR3P41439 243 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 EIF1P41567 113 aaKnown RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CRYBB2P43320 205 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 P2RX1P51575 399 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 WNT4P56705 351 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 E2F1Q01094 437 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 FABP5Q01469 135 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 Q0VFX4 171 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CHAF1BQ13112 559 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CLN3Q13286 438 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 IL10RAQ13651 578 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CBFBQ13951 182 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 TAB1Q15750 504 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 KLHL22Q53GT1 634 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ALG10Q5BKT4 473 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 FAM27D1Q5T7N8 215 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ATP1A1-AS1Q5TC04 95 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 HES3Q5TGS1 186 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 BRICD5Q6PL45 260 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 MDGA2Q7Z553 956 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 GPALPP1Q8IXQ4 340 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ZNF440Q8IYI8 595 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 NPEPL1Q8NDH3 523 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 DEFB124Q8NES8 71 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PROKR2Q8NFJ6 384 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 OR13C5Q8NGS8 318 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 OR5J2Q8NH18 312 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SMPDL3BQ92485 455 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 HTRA1Q92743 480 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 RFKQ969G6 155 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 C1GALT1C1Q96EU7 318 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 GNRHR2Q96P88 292 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 TSPAN32Q96QS1 320 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PTDSS2Q9BVG9 487 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 ALG8Q9BVK2 526 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SLIRPQ9GZT3 109 aaKnown RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 SLC26A1Q9H2B4 701 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 FGF20Q9NP95 211 aaPredicted RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 AKIP1Q9NQ31 210 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 TMEM9BQ9NQ34 198 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 EXOSC3Q9NQT5 275 aaKnown RBP4.59□□□□□ -1.68
ATXN3-202ENST00000359366 COA4Q9NYJ1 87 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PPP4R1LQ9P1A2 415 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 PADI1Q9ULC6 663 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 COPS3Q9UNS2 423 aa4.59□□□□□ -1.68
ATXN3-202ENST00000359366 DOCK7Q96N67 2140 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 NSG1A0A0A6YYJ2 146 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 A0A1W2PNR3 127 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 PRR32B1ATL7 298 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 CTDSP2O14595 271 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 MRPS14O60783 128 aaKnown RBP4.58□□□□□ -1.68
ATXN3-202ENST00000359366 BGLAPP02818 100 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 GP1BAP07359 652 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 ASAH2BP0C7U1 165 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 BMP4P12644 408 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 SPI1P17947 270 aa4.58□□□□□ -1.68
ATXN3-202ENST00000359366 PGCP20142 388 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms