RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM81Q6P7N7 255 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 SLC16A14Q7RTX9 510 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 SMIM19Q96E16 107 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 SLC6A18Q96N87 628 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 DOK1Q99704 481 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 EMC3Q9P0I2 261 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 ATG12O94817 140 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 SLC34A2O95436 690 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 NPY4RP50391 375 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 MLC1Q15049 377 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 CAMKMTQ7Z624 323 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 ZNF286AQ9HBT8 521 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 IGHV3-20A0A0C4DH32 117 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 IFITM5A6NNB3 132 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 ITGB2P05107 769 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 PMPCAQ10713 525 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 IAH1Q2TAA2 248 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 LHX8Q68G74 356 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 CD300LGQ6UXG3 332 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 GCDHQ92947 438 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 ARPC5LQ9BPX5 153 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 PAPOLGQ9BWT3 736 aaKnown RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 RAB22AQ9UL26 194 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 APLNRP35414 380 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 ETV6P41212 452 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RPL27P61353 136 aaKnown RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 CD300CQ08708 224 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 CCDC71Q8IV32 467 aaPredicted RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 SYS1Q8N2H4 156 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 NAT6Q93015 286 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 LINC00615Q96LM1 132 aaPredicted RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 CNTNAP3Q9BZ76 1288 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 RAF1P04049 648 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 NAGAP17050 411 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 EMP3P54852 163 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 GABREP78334 506 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 BTG2P78543 158 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RUNX2Q13950 521 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 LYSMD4Q5XG99 296 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 FCRL6Q6DN72 434 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 KLHDC8BQ8IXV7 354 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 MED30Q96HR3 178 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 DCBLD2Q96PD2 775 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 DERL3Q96Q80 235 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 OBP2AQ9NY56 170 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 ACAD8Q9UKU7 415 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 TMEM235A6NFC5 223 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 AIPO00170 330 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 TGM6O95932 706 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 CALCBP10092 127 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 CPT2P23786 658 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RPS10P46783 165 aaKnown RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 CLDN20P56880 219 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RAE1P78406 368 aaKnown RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 BDH1Q02338 343 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 ACKR1Q16570 336 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 GRINAQ7Z429 371 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 LIX1LQ8IVB5 337 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 NKAIN3Q8N8D7 197 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 ZNF680Q8NEM1 530 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 GOT1L1Q8NHS2 421 aaPredicted RBP12.56□□□□□ -0.4
VCP-201ENST00000358901 RNF141Q8WVD5 230 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 SSX3Q99909 188 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 RREB1Q92766 1687 aa12.56□□□□□ -0.4
VCP-201ENST00000358901 ZNF780AO75290 641 aaPredicted RBP12.55□□□□□ -0.4
VCP-201ENST00000358901 CEACAM5P06731 702 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 CD53P19397 219 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 RAD52P43351 418 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 AFF3P51826 1226 aaKnown RBP12.55□□□□□ -0.4
VCP-201ENST00000358901 NPSR1Q6W5P4 371 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 AAED1Q7RTV5 226 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 SCARB1Q8WTV0 552 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 NMNAT2Q9BZQ4 307 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 BANF2Q9H503 90 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.55□□□□□ -0.4
VCP-201ENST00000358901 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
VCP-201ENST00000358901 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 GIPP09681 153 aaPredicted RBP12.55□□□□□ -0.4
VCP-201ENST00000358901 DPP4P27487 766 aa12.55□□□□□ -0.4
VCP-201ENST00000358901 H1FNTQ75WM6 255 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms