RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 COX15Q7KZN9 410 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 LGALS14Q8TCE9 139 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 C15orf40Q8WUR7 153 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 TSSK2Q96PF2 358 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 PDCD1LG2Q9BQ51 273 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 SLITRK2Q9H156 845 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 OR51J1Q9H342 316 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 NOX4Q9NPH5 578 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 CTSFQ9UBX1 484 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 CCDC187A0A096LP49 1063 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 A0A1B0GVC2 190 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 A6NIN4 97 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 A6NL46 340 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 IDSB3KWA1 339 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 NUDT14O95848 222 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RENP00797 406 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 CD3GP09693 182 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RAB40ALP0C0E4 278 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 CALCBP10092 127 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 AP3S2P59780 193 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RIPPLY1Q0D2K3 151 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 CBFBQ13951 182 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 FCN2Q15485 313 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 THOC7Q6I9Y2 204 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 POMZP3Q6PJE2 187 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RAB11FIP2Q7L804 512 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 FGD2Q7Z6J4 655 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 CDC20BQ86Y33 519 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 DTX3Q8N9I9 347 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RAB40AQ8WXH6 277 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 NXPE2Q96DL1 559 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 ADAD1Q96M93 576 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 ZFP3Q96NJ6 502 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SMAD5Q99717 465 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 STRADBQ9C0K7 418 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SRA1Q9HD15 236 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 ZNF346Q9UL40 294 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SRPK3Q9UPE1 567 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 LOXL2Q9Y4K0 774 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 FER1L5A0AVI2 2057 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 H7C1C5 153 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 PSMD9O00233 223 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 PIN1P1O15428 100 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 FADS1O60427 444 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 H2AFB2P0C5Z0 115 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 ANXA3P12429 323 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 GIFP27352 417 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 MNDAP41218 407 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SCAND1P57086 179 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 GNG2P59768 71 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 LCN6P62502 163 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 GALK2Q01415 458 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RTP5Q14D33 572 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 LAMTOR1Q6IAA8 161 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 LUZP2Q86TE4 346 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 CMTM4Q8IZR5 234 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 THRSPQ92748 146 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 RNF166Q96A37 237 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 SLC22A11Q9NSA0 550 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 ETV7Q9Y603 341 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 V9GY05 133 aa12.89□□□□□ -0.35
NIPAL3-203ENST00000358028 LOC400499M0QZD8 3231 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TRAV6A0A075B6T7 132 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 A0A1B0GVI7 797 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TMEM72A0PK05 275 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 GABARAPH6UMI1 98 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 DCTN6O00399 190 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 PHYHO14832 338 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TOX3O15405 576 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 SLC25A12O75746 678 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 DPP4P27487 766 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 P2RX1P51575 399 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 POLR2HP52434 150 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TRA2AQ13595 282 aaKnown RBP eCLIP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 Q499Y3 187 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 FAM205BPQ63HN1 556 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 FAM199XQ6PEV8 388 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 LRRN1Q6UXK5 716 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 SHISA6Q6ZSJ9 500 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 MAMDC2Q7Z304 686 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 DIABLOQ9NR28 239 aa12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 MRPS7Q9Y2R9 242 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-203ENST00000358028 TMEM14AQ9Y6G1 99 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms