RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 HIVEP1P15822 2718 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 IGHV2OR16-5A0A0B4J2B6 119 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC22A23A1A5C7 686 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 H7C1Q1 480 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 H7C417 338 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 IGHMP01871 453 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 DSCR9P59020 149 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 HSF2Q03933 536 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 CLEC2AQ6UVW9 174 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 IGFN1Q86VF2 1251 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 DHFR2Q86XF0 187 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 KRTAP1-3Q8IUG1 177 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 SKA3Q8IX90 412 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 ARIH2OSQ8N7S6 290 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 RHNO1Q9BSD3 238 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 TRIM15Q9C019 465 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF442Q9H7R0 627 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 SIAEQ9HAT2 523 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 IL1RAPQ9NPH3 570 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
TSPAN4-201ENST00000346501 AHCYL1O43865 530 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SSX4O60224 188 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 OR10H3O60404 316 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 KRT36O76013 467 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 DIRAS1O95057 198 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SERPINA5P05154 406 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 CD14P08571 375 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 CELA3BP08861 270 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 OR4A8P0C604 315 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 RPS6KA3P51812 740 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 RIPPLY3P57055 190 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SELENOVP59797 346 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 MRPS34P82930 218 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 RUNX1T1Q06455 604 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SNTB2Q13425 540 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SGCAQ16586 387 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 GPR139Q6DWJ6 353 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 C11orf71Q6IPW1 123 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 UNQ6126/PRO20091Q6UXV3 157 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 CYP2R1Q6VVX0 501 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 TRPM8Q7Z2W7 1104 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 MEX3DQ86XN8 651 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 ALDH16A1Q8IZ83 802 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 LRRC18Q8N456 261 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 LINC00471Q8N535 108 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 FAM86B1Q8N7N1 296 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 NSMAFQ92636 917 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF570Q96NI8 536 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 KCNK17Q96T54 332 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SEPHS2Q99611 448 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SH3GL3Q99963 347 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 VRK1Q99986 396 aaPredicted RBP13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 C1orf21Q9H246 121 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 SEC61A2Q9H9S3 476 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 NOX3Q9HBY0 568 aa13.68□□□□□ -0.22
TSPAN4-201ENST00000346501 TEP1Q99973 2627 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 TRBV4-1A0A0J9YWV2 114 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 UNC119BA6NIH7 251 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 SMAD7O15105 426 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC2A10O95528 541 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 IGHV4-39P01824 125 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 CSF3P09919 207 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF14P17017 642 aaPredicted RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 CALCRP30988 508 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 RRM2P31350 389 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 APLNRP35414 380 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 PCBD1P61457 104 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 ERVK-25P63136 954 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 RAB39AQ14964 217 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 TBC1D28Q2M2D7 210 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 FAM98BQ52LJ0 330 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 KRT80Q6KB66 452 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 WDFY1Q8IWB7 410 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 RSRC1Q96IZ7 334 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 DHRS1Q96LJ7 313 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 PLK3Q9H4B4 646 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC7A8Q9UHI5 535 aa13.67□□□□□ -0.22
TSPAN4-201ENST00000346501 SH3PXD2BA1X283 911 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF503-AS2A6NEH8 195 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 CDC42EP2O14613 210 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 NR4A1P22736 598 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 THBS4P35443 961 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 OMPP47874 163 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 EFNA4P52798 201 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 EFNB3Q15768 340 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 ADIPOQQ15848 244 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 DNAL1Q4LDG9 190 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 CLEC9AQ6UXN8 241 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 RINLQ6ZS11 566 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms