RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 FTCDNL1E5RQL4 147 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 K7ESF4 209 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 MPZL1O95297 269 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 HPXP02790 462 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 SLC17A1Q14916 467 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 TMEM69Q5SWH9 247 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 C9orf62Q8N4C0 152 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 GPR148Q8TDV2 347 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 C8orf44Q96CB5 159 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 S100A16Q96FQ6 103 aaKnown RBP13.9□□□□□ -0.18
UPF3B-202ENST00000345865 OR2M2Q96R28 347 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 COMMD4Q9H0A8 199 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 SLITRK2Q9H156 845 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF222Q9UK12 451 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 PI4KAP42356 2102 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 ANKRD34BA5PLL1 514 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 CD276Q5ZPR3 534 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 RHBDD2Q6NTF9 364 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 NFAM1Q8NET5 270 aaPredicted RBP13.9□□□□□ -0.18
UPF3B-202ENST00000345865 ARL5BQ96KC2 179 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 NKX3-1Q99801 234 aaPredicted RBP13.9□□□□□ -0.18
UPF3B-202ENST00000345865 TGIF2Q9GZN2 237 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
UPF3B-202ENST00000345865 KIF26BQ2KJY2 2108 aa13.9□□□□□ -0.19
UPF3B-202ENST00000345865 CENPBD1B2RD01 187 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 KRT33AO76009 404 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 SPARCP09486 303 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 ART1P52961 327 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 ANKRD37Q7Z713 158 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 BIVMQ86UB2 503 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 HYLS1Q96M11 299 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 SEMA4CQ9C0C4 833 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 SUSD2Q9UGT4 822 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 TMEM200CA6NKL6 621 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 GPR171O14626 319 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 RAF1P04049 648 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
UPF3B-202ENST00000345865 DCNP07585 359 aaKnown RBP13.89□□□□□ -0.19
UPF3B-202ENST00000345865 RAB40ALP0C0E4 278 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 EFNB2P52799 333 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 RAG2P55895 527 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 TAS2R20P59543 309 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 MFGE8Q08431 387 aaPredicted RBP13.89□□□□□ -0.19
UPF3B-202ENST00000345865 RASGEF1BQ0VAM2 473 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 TEX30Q5JUR7 227 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 YOD1Q5VVQ6 348 aaPredicted RBP13.89□□□□□ -0.19
UPF3B-202ENST00000345865 FDX2Q6P4F2 183 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 ZNF679Q8IYX0 411 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 OR56B4Q8NH76 319 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 FCAMRQ8WWV6 532 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 KCNK15Q9H427 330 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 WNT16Q9UBV4 365 aa13.89□□□□□ -0.19
UPF3B-202ENST00000345865 IGLV3-12A0A075B6K2 115 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 PHYHO14832 338 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 TMEM127O75204 238 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 IGHMP01871 453 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 DCTDP32321 178 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 ZP1P60852 638 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 ADAM8P78325 824 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 ARSKQ6UWY0 536 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 STK35Q8TDR2 534 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 RNF128Q8TEB7 428 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 PIGKQ92643 395 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 PMEPA1Q969W9 287 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 EMC7Q9NPA0 242 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
UPF3B-202ENST00000345865 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
UPF3B-202ENST00000345865 COA3Q9Y2R0 106 aaPredicted RBP13.88□□□□□ -0.19
UPF3B-202ENST00000345865 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ERVH48-1M5A8F1 160 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SULT1B1O43704 296 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ZNF432O94892 652 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 OR6A2O95222 327 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 AHSA1O95433 338 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ITGA5P08648 1049 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 FBXO45P0C2W1 286 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SULT1A3P0DMM9 295 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SULT1A4P0DMN0 295 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 CCKBRP32239 447 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 OR7E24Q6IFN5 339 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 GUSBP11Q6P575 273 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 TMEM71Q6P5X7 295 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 MAMSTRQ6ZN01 415 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 MRI1Q9BV20 369 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ABHD6Q9BV23 337 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SLC7A5P2Q9GIP4 190 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 MRPL39Q9NYK5 338 aaKnown RBP13.87□□□□□ -0.19
UPF3B-202ENST00000345865 MED11Q9P086 117 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 ETV7Q9Y603 341 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
UPF3B-202ENST00000345865 SHISA8B8ZZ34 492 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms