RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 SMUG1Q53HV7 270 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 C3orf33Q6P1S2 294 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 DND1Q8IYX4 353 aaKnown RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 GABRG1Q8N1C3 465 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR13H1Q8NG92 308 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 NT5CQ8TCD5 201 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 NKX3-1Q99801 234 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 SHPKQ9UHJ6 478 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 EDARQ9UNE0 448 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 A6NIZ1 184 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 SUSD5O60279 629 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 SCGNO76038 276 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 RAP1BP61224 184 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 YPEL5P62699 121 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 RAP1AP62834 184 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 FAM74A1Q5RGS3 127 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 LCN10Q6JVE6 187 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 FAM71CQ8NEG0 241 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 WDR89Q96FK6 387 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 EIF5A2Q9GZV4 153 aaKnown RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR5V1Q9UGF6 321 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 MRPS2Q9Y399 296 aaKnown RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 A0A1B0GV50 99 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 TAS2R31P59538 309 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 RAB5BP61020 215 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 MFSD13AQ14CX5 517 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR10K2Q6IF99 312 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 NHLRC1Q6VVB1 395 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR5T2Q8NGG2 359 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR4C3Q8NH37 302 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 TOE1Q96GM8 510 aaKnown RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 BMFQ96LC9 184 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 SEMA6CQ9H3T2 930 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF346Q9UL40 294 aaKnown RBP14.17□□□□□ -0.14
PTPRU-201ENST00000345512 C7orf66A4D0T2 115 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 P2RY10O00398 339 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 ETFBKMTQ8IXQ9 262 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 RLN3Q8WXF3 142 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 OR2A5Q96R48 311 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 KCNJ15Q99712 375 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 MICU1Q9BPX6 476 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 C1QTNF6Q9BXI9 259 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 RGCCQ9H4X1 137 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 KCNG2Q9UJ96 466 aa14.17□□□□□ -0.14
PTPRU-201ENST00000345512 TRAV36DV7A0A075B6V5 113 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 A0A1B0GTH9 108 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 TMEM235A6NFC5 223 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 MOSPD3O75425 235 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 NDUFB6O95139 128 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 LPLP06858 475 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 SULT1A3P0DMM9 295 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 SULT1A4P0DMN0 295 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF14P17017 642 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF681Q96N22 645 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 WDR77Q9BQA1 342 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-201ENST00000345512 NUDT22Q9BRQ3 303 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 GHITMQ9H3K2 345 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 PTGES2Q9H7Z7 377 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 A0A0B4J293 547 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 SHISA3A0PJX4 238 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 HOXB5P09067 269 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 TNFRSF4P43489 277 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 DAP3P51398 398 aaKnown RBP14.16□□□□□ -0.14
PTPRU-201ENST00000345512 KCNAB1Q14722 419 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF425Q6IV72 752 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ARIH2OSQ8N7S6 290 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 FAM181AQ8N9Y4 354 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 LCORQ96JN0 433 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-201ENST00000345512 LRRC3BQ96PB8 259 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 MCCC2Q9HCC0 563 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ACKR4Q9NPB9 350 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 TAS2R4Q9NYW5 299 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 CHD5Q8TDI0 1954 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 NR2C1P13056 603 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 TBXA2RP21731 343 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 SPIN3Q5JUX0 258 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 PAPD4Q6PIY7 484 aaKnown RBP14.16□□□□□ -0.14
PTPRU-201ENST00000345512 PARM1Q6UWI2 310 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 ADGRE4PQ86SQ3 457 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 MARCH3Q86UD3 253 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 FRMD1Q8N878 549 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 OR51T1Q8NGJ9 327 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 SLCO5A1Q9H2Y9 848 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
PTPRU-201ENST00000345512 BORCS7-ASMTA0A0B4J1R7 106 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 IGKV1-8A0A0C4DH67 115 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 OR5K3A6NET4 321 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 XRCC3O43542 346 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 VAMP2P63027 116 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 DOC2BQ14184 412 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 MCOLN1Q9GZU1 580 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 HRH3Q9Y5N1 445 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 A0A087WUJ7 227 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 OR5H14A6NHG9 310 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 NKX2-2O95096 273 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 CT62P0C5K7 136 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 ZGLP1P0C6A0 271 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 BDKRB2P30411 391 aa14.15□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF136P52737 540 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms