RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PPP3CBP16298 524 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 CAV2P51636 162 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 BTN1A1Q13410 526 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FAAP20Q6NZ36 180 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 OR4K15Q8NH41 348 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 STRADBQ9C0K7 418 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 EIF5A2Q9GZV4 153 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 SLC22A13Q9Y226 551 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 NRXN2Q9P2S2 1712 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SVILO95425 2214 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DOCK3Q8IZD9 2030 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 A0A0A6YYJ9 748 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 A0A1B0GX78 115 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 A0A1W2PPC4 97 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 GCM2O75603 506 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 IFNGR1P15260 489 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR1D5P58170 312 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZIC1Q15915 447 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 NKAIN1Q4KMZ8 207 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 LYSMD4Q5XG99 296 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 TIGD3Q6B0B8 471 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SLC22A24Q8N4F4 322 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 RAB3CQ96E17 227 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 VRK1Q99986 396 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 PPA2Q9H2U2 334 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 POMT2Q9UKY4 750 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 TRIP12Q14669 1992 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 TSPAN15O95858 294 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 LALBAP00709 142 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SERPINA2P20848 420 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 EEF1A1P68104 462 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 IRF3Q14653 427 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 PPA1Q15181 289 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SLC36A2Q495M3 483 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR56B1Q8NGI3 324 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR2G2Q8NGZ5 317 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 RNF170Q96K19 258 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ERVMER34-1Q9H9K5 563 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 GGT3PA6NGU5 568 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 G3V3Y1 287 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 TPT1P13693 172 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 APEHP13798 732 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 GABRR1P24046 479 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZNF93P35789 620 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 SLC26A5P58743 744 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 EEF1A2Q05639 463 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 MALLQ13021 153 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 BCL2A1Q16548 175 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 LPAL2Q16609 132 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 MRM1Q6IN84 353 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 STAC2Q6ZMT1 411 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR1J4Q8NGS1 313 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SIGLEC11Q96RL6 698 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 NICN1Q9BSH3 213 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR10A2Q9H208 303 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZNF576Q9H609 170 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 HRASLSQ9HDD0 168 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 EHFQ9NZC4 300 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 KLK11Q9UBX7 282 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 MRPS28Q9Y2Q9 187 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 LOC107986453A0A1B0GWG9 222 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 CIB4A0PJX0 185 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 GJE1A6NN92 205 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 IDSB3KWA1 339 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 E9PI62 339 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 LINC01565O15544 149 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 NTN1O95631 604 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 WDPCPO95876 746 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 PRKACBP22694 351 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 CAMLGP49069 296 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SRYQ05066 204 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 C1orf53Q5VUE5 145 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SULF2Q8IWU5 870 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 C17orf47Q8NEP4 570 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 RADILQ96JH8 1075 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DCLRE1CQ96SD1 692 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 SEMA4CQ9C0C4 833 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 RGCCQ9H4X1 137 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZFP57Q9NU63 452 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 PLEKHB1Q9UF11 243 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 EP300Q09472 2414 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 POLR2AP24928 1970 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 A0A0D9SG52 128 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DCTDP32321 178 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 CCR5P51681 352 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 PER3P56645 1201 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 MFAP5Q13361 173 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ABHD17BQ5VST6 288 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR10K2Q6IF99 312 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 LAIR2Q6ISS4 152 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 RFPL4BQ6ZWI9 263 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 SLC51BQ86UW2 128 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZNF679Q8IYX0 411 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 MORN4Q8NDC4 146 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZNF680Q8NEM1 530 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 STT3BQ8TCJ2 826 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DUSP23Q9BVJ7 150 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 FKRPQ9H9S5 495 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 CHRNA9Q9UGM1 479 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms